Gene Pden_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2858 
Symbol 
ID4581445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp26732 
End bp27211 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID639770185 
ProductNADH dehydrogenase (ubiquinone), 24 kDa subunit 
Protein accessionYP_916638 
Protein GI119385583 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0907196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAC CAGCGACCGA CGCTGATTTC CTTTTGCGCC TTGACGAAAT CATCGCCGCC 
CACAAGGGCC GCGAGGGGCC GCTTTTGCCC ATCCTGCACG ATCTCCAGGC CGAATGGGGC
TATGTCCCCG AGGAGGCGCA GCCGGTGCTG GCCGAGGCGC TGGGCATGAC GCGTGCCGAG
GTGCATGGCG TCGTGAGCTT CTATCACGAT TTCCGCGACC ATCCCCACGG CCGGCATGTG
CTGCGGCTGT GCCGCGCCGA GGCCTGCCAG TCGATGGGGG CCGAGGCGCT GGCCGACGAG
GTGCGCGCCG CGCTGGGAAT CGACTGGCAC GAGACCACGC CGGACGGGCG GCTGACGCTG
GAGCCGGTGT TCTGCCTGGG GCTGTGCGCC TGTGCGCCCT CGGCGCAGAT GGGCGAAAGG
CTGATCGGCC GGGCGAGCCT TGCCAAGGTG CAGAAGCTGG TGGCGGAGGC GGGCGCATGA
 
Protein sequence
MTSPATDADF LLRLDEIIAA HKGREGPLLP ILHDLQAEWG YVPEEAQPVL AEALGMTRAE 
VHGVVSFYHD FRDHPHGRHV LRLCRAEACQ SMGAEALADE VRAALGIDWH ETTPDGRLTL
EPVFCLGLCA CAPSAQMGER LIGRASLAKV QKLVAEAGA