Gene Pden_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2857 
Symbol 
ID4581444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp25194 
End bp26735 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content69% 
IMG OID639770184 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_916637 
Protein GI119385582 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.501493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTCT GGGTTCCCCT GGATGCCGCC GCAAGGGCCT TGGGTGCCGA CGAGGTGGCC 
GAGGCGCTGG GGCGCGAGTT CACCATCACC CGCAACGGCA CGCGCGGCAT GATCTGGCTG
GAGCCGTTGG TCGAGGTCGA GCGCGACGGC GTGCGCTACG GCTATGGGCC GGTGGCGCCC
GAGGACGCGG CCTCGGTCGC CGAGGCGATC CGTTCGGGCG GCGAGCATCC GCTGGCGCTG
GGGCCGGTCG AGGAACTGCC GTGGATGAAG GCGCAGACCC GGCTGACATT CGCCCGCGTG
GGCGTGATCG ACCCGCTGTC GGTGTCCGAA TACGAGGCGC ATGGCGGGCT GGTCGGGCTG
AGCCGCGCCA TCGAGATCGG GCCGGAGCGG ATCGTCGAGG AGGTCACCGA ATCCGGTCTG
CGCGGACGGG GCGGCGCCGG TTTCCCGACG GGGATCAAGT GGAAGACCGT GGCCGGCGCC
AAGGCCGCGC GGAAATACAT CGTCTGCAAT GCCGACGAGG GCGATTCGGG CAGCTTCGCA
GACCGGATGC TGATGGAGGG CGATCCGCTG GTCCTGATCG AGGGCATGGC CATCGCCGGC
ATCGCCACGG GCGCGGTGCA GGGCTATGTC TATATCCGCA GCGAATACCC CGACGCGATC
CGGCTGATGG AGGCCGCCAT CGGCAAGGCG CGGCAGGCGG GCATCCTGGG CCAGTCGGTG
CTGGGCTCGG CCCATGCCTA TGACATGGAG GTGCGGGTCG GCGCCGGCGC CTATGTCTGC
GGCGAGGAAA CGAGCCTGCT CAACAGCCTG GAAGGCAAGC GCGGCGTGGT CCGCGCCAAG
CCGCCGATCC CGGCGCTGGA GGGTTTCCTG GGCCGGCCGA CGGTGGTCAA CAACGTGATC
TCGCTGGCTT CGGTGCCTTG GATCCTGAGC CATGGCGGGG CGGAATACGC GAAACTGGGC
ATCGGGCGCT CCAAGGGCAC GATCCCGATC CAGATCGCCG GCAACGTGAA ATACGGCGGG
CTGTTCGAGG CCGCATTCGG CATGTCGCTG GGCCAGATCA TCAACGAGGT CGGCGGCGGG
ACCGCCTCGG GGCGGCCGGT CAAGGCGGCG CAGGTGGGGG GCCCCCTGGG CTCCTACATC
CCGCATTGGA ATTTCGACGT GCCCTTCGGC TATGAGGAAC TGGCCGGGAA AGAGGGGCTG
CTGGGCCATG CCGGCATCAC CGTCTTCGAC GACACGGCCG ACATGCTGAA GCTCGCGCGC
TTTGCCATGG AGTTCTGCGC CGTAGAAAGC TGCGGCAAAT GCACGCCCTG CCGCATCGGC
TCGATCCGGG GTGTCGAGAC CATCGACCGC ATCGCCCAGG GCGACGAAAC GGGGATCGCG
ATCCTCACCG ACCTTTGCAA CACGATGAAA TGGGGCTCGC TTTGCGCGCT GGGGGGCTTT
GCGCCCTTCC CGGTCATGTC GGCGCTGACC CATTTCCCCG ACGATTTCAG CGGGCGGCGG
GAGCCGCGCG CCATAATCAG GAGCCGGGAG GCCGCAGAAT GA
 
Protein sequence
MRVWVPLDAA ARALGADEVA EALGREFTIT RNGTRGMIWL EPLVEVERDG VRYGYGPVAP 
EDAASVAEAI RSGGEHPLAL GPVEELPWMK AQTRLTFARV GVIDPLSVSE YEAHGGLVGL
SRAIEIGPER IVEEVTESGL RGRGGAGFPT GIKWKTVAGA KAARKYIVCN ADEGDSGSFA
DRMLMEGDPL VLIEGMAIAG IATGAVQGYV YIRSEYPDAI RLMEAAIGKA RQAGILGQSV
LGSAHAYDME VRVGAGAYVC GEETSLLNSL EGKRGVVRAK PPIPALEGFL GRPTVVNNVI
SLASVPWILS HGGAEYAKLG IGRSKGTIPI QIAGNVKYGG LFEAAFGMSL GQIINEVGGG
TASGRPVKAA QVGGPLGSYI PHWNFDVPFG YEELAGKEGL LGHAGITVFD DTADMLKLAR
FAMEFCAVES CGKCTPCRIG SIRGVETIDR IAQGDETGIA ILTDLCNTMK WGSLCALGGF
APFPVMSALT HFPDDFSGRR EPRAIIRSRE AAE