| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2856 |
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| Symbol | |
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| ID | 4581443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 22318 |
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| End bp | 25197 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639770183 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_916636 |
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| Protein GI | 119385581 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGATT TCATCATTCC CGACCGCGAC ATGGGCACCC CGGCGGTCAA GTCCGACGTC
ACCGTGAACC TGCTGGTGGA CGGGATTCCG GTCTCGGTCC CTGCAGGCAC CAGCGTCATG
CGCGCCGCCG CCGTGGCCGG GATCTCGGTG CCCAAGCTCT GCGCCACCGA CCATGTCAGC
GCCTTCGGCT CCTGCCGGCT TTGCGTGGTG CAGATCGACG GCATGCGGGG CCTGCCGGCA
TCCTGCACGA CGCCGGTGGC CGAGGGCATG GTGGTCCACA CCCAGACCGA CGAGGTCGCC
CAGGTCCGCA AGGGGGTGAT GGAGCTTTAC ATCTCGGATC ACCCGCTGGA TTGCCTGACC
TGCGCCGCCA ACGGCGATTG CGAATTGCAG GACATGGCCG GCGCCGTCGG GCTGCGCGAG
GTGCGCTATG AGCCGGGCAA GAACCATTTC GCCCGCCGCG ACGCCGAGGG GCCGAACCCG
GAATACCGGC CCAAGGACCA GTCGAACCCC TATTTCACCT TCGATCCGGC GAAATGCATC
GTCTGCTCGC GCTGCGTGCG GGCCTGCGAG GAGGTGCAGG GCACCTTTGC GCTGACCATC
GAGGGGCGGG GCTTCGACAG CCGCGTCTCG GCCGGGCTGG CGTCGGACGA TTTCCTGTCG
TCGGATTGCG TCAGCTGCGG TGCCTGCGTG CAGGTCTGTC CGACCGCCAC GCTGATCGAG
AACAGTGTGA TCCAGATCGG CACACCCGAG CATATCGTCA AGACGACCTG CGCCTATTGC
GGCGTCGGCT GCTCCTTCGA TGCGCATATG CGCGGCGAGG AGGTGGTGCG CATGGTGCCC
AGCAAGGACG GCAAGGCGAA CCACGGCCAC AGCTGCGTCA AGGGCCGCTT CGCCTGGGGC
TATGCCACGC ATCGCGAGCG GCAGACCCAG CCGATGGTGC GCGAGCGGAT CACCGATCCC
TGGCGCGTGG TCAGCTGGGA CGAGGCGCTG GATTTCGCTG CCACCCGGCT GCGGCAGGCG
CAGGCGGATT TCGGGCGCGA TTCCATCGGC GTCATAACCT CGTCGCGCTG CACCAACGAG
GAAACCTATC TGGTGCAGAA GCTCGCCCGC GCGGTCTTTC ACAACAACAA CACCGACACC
TGCGCCCGGG TCTGCCATTC GCCCACCGGC TACGGGCTCA AGACCACCTT CGGCACCTCG
GCCGGCACGC ATGACTTCGA TTCGGTCGAT GATACCGACC TGGCGCTGGT CATCGGCGCC
AACCCGACCG ACGGCCACCC GGTCTTTGCC TCGCGCCTGC GCAAGCGGCT GCGCGAGGGT
GCCGGGCTGA TCGTTCTCGA CCCGCGCGAG ATCGACCTGC TCAAGTCCCC GCATATGGGC
GAAGGGCTGC ACCTGCCCCT GCGTCCCGGC ACCAACGTCG CCATGCTGAC GGCCATGGCG
CAGGTGATCG TGGCCGAGAA GCTCTATGAC GAGGCCTTCA TCCGCGAGCG CTGCGACTGG
GACGAGTTCC TGGCCTATGC CGAGTTCCTG ATGGACCCTC GCCATGCGCC CGAGGAGGTC
GAGAAACTGG CCCGCGTACC GGCCGAGCTG ATCCGCAAGG CCGCCCGCGC CTATGCGGCC
GCGCCGCGTG CCAGCATCTA TTACGGGCTG GGCGTGACCG AGCATTCGCA GGGCTCGACC
ACGGTGATGG CGATCGCCAA CCTGGCGATG ATGACCGGCA ATATCGGCAG GCCCGGCACC
GGCGTGAACC CGCTGCGCGG CCAGAACAAC GTGCAGGGCT CCTGCGACAT GGGCAGCTTC
CCGCATGAAT ATCCGGGCTA TCGCCATGTC TCGGACCCCG AGACGCGCGC GATCTACGAA
CGGATCTGGG GCGTCGAGCT GTCGCCCGAG CCGGGCCTGC GCATCCCCAA CATGTTCGAC
GAGGCGCTGG CCGGACGCTT CCGTGGGCTT TACTGCCAGG GCGAGGACAT CGTGCAATCC
GACCCCGACA CGCGGCATGT GACCTCGGCG CTGTCGGCGA TGGACATCGT CATCGTGCAG
GACCTGTTCC TGAACGAGAC CGCGAACTAT GCGCATGTCT TCCTGCCGGG ATCGAGTTTC
CTGGAAAAGA ACGGCACCTT CACCAATGCC GAGCGGCGCA TCAACATGGT CCGCCGCGCC
ATGACGCCCA AGAACGGCTA CGAGGACTGG GAAGTCACGC AGTTGCTGGC GAACCGCATG
GGGGCCGCCT GGACCTATGT CCACCCGCGC GAGATCATGG CCGAGATCGC GCTGACCACG
CCCAGTTTCT CGGGCGTCAG CTACGATCTT CTGGAGCGCG AGGGCTCGGT GCAGTGGCCC
TGCAACGACA AGGCGCCGCT GGGCACGCCG CTCATGCATA TCGACGGCTT CGTGCGCGGC
CGGGGCAAGT TCGTCCATAC CGAATATGTC GCGACCGAGG AGCGCACCGG GGCACGCTTC
CCGCTGTTGC TGACCACCGG GCGGATCCTG TCGCAATACA ATGTCGGCGC GCAGACCCGG
CGGACGGAAA ACGTGGTCTG GCACCCCGAG GACATCCTGG AGATCCACCC CTCGGATGCC
GAGAATCGCG GCGTGCGCGA GGGCGACTGG GTGCGGCTGG CCTCGCGTTC GGGCGACACT
ACGCTGAGGG CGCATATCAC CGAGCGGGTG GCGCCGGGCG TGGTCTATAC CACCTTCCAT
CACCCGACGA CTCAGGCCAA TGTGGTGACG ACGGACAATT CCGACTGGGC CACCAACTGC
CCCGAGTTCA AGGTGACGGC CGTGCAGGTC AGTCCCTCGA ACGGCCCGTC GGATTGGCAA
GAGGAGTATC GCCATCATTC CGACCTCGCC CGCCGCATCC TGCCCACCGC TGCCGAGTGA
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| Protein sequence | MKDFIIPDRD MGTPAVKSDV TVNLLVDGIP VSVPAGTSVM RAAAVAGISV PKLCATDHVS
AFGSCRLCVV QIDGMRGLPA SCTTPVAEGM VVHTQTDEVA QVRKGVMELY ISDHPLDCLT
CAANGDCELQ DMAGAVGLRE VRYEPGKNHF ARRDAEGPNP EYRPKDQSNP YFTFDPAKCI
VCSRCVRACE EVQGTFALTI EGRGFDSRVS AGLASDDFLS SDCVSCGACV QVCPTATLIE
NSVIQIGTPE HIVKTTCAYC GVGCSFDAHM RGEEVVRMVP SKDGKANHGH SCVKGRFAWG
YATHRERQTQ PMVRERITDP WRVVSWDEAL DFAATRLRQA QADFGRDSIG VITSSRCTNE
ETYLVQKLAR AVFHNNNTDT CARVCHSPTG YGLKTTFGTS AGTHDFDSVD DTDLALVIGA
NPTDGHPVFA SRLRKRLREG AGLIVLDPRE IDLLKSPHMG EGLHLPLRPG TNVAMLTAMA
QVIVAEKLYD EAFIRERCDW DEFLAYAEFL MDPRHAPEEV EKLARVPAEL IRKAARAYAA
APRASIYYGL GVTEHSQGST TVMAIANLAM MTGNIGRPGT GVNPLRGQNN VQGSCDMGSF
PHEYPGYRHV SDPETRAIYE RIWGVELSPE PGLRIPNMFD EALAGRFRGL YCQGEDIVQS
DPDTRHVTSA LSAMDIVIVQ DLFLNETANY AHVFLPGSSF LEKNGTFTNA ERRINMVRRA
MTPKNGYEDW EVTQLLANRM GAAWTYVHPR EIMAEIALTT PSFSGVSYDL LEREGSVQWP
CNDKAPLGTP LMHIDGFVRG RGKFVHTEYV ATEERTGARF PLLLTTGRIL SQYNVGAQTR
RTENVVWHPE DILEIHPSDA ENRGVREGDW VRLASRSGDT TLRAHITERV APGVVYTTFH
HPTTQANVVT TDNSDWATNC PEFKVTAVQV SPSNGPSDWQ EEYRHHSDLA RRILPTAAE
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