Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2842 |
Symbol | |
ID | 4581429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 10132 |
End bp | 11280 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639770169 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_916622 |
Protein GI | 119385567 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGA TCCCCGATCC CGCCCAACTG ACCGCCAGGC TGATCCGCTG CGCCTCGGTC ACGCCCGACG AGGGCGGCGC GCTGGTCTTG CTGGCCGATG TGCTGGGCGC GGCGGGGTTC GAATGCCACC GCGTCGACCG CGAGGGCGTG CCGAACCTGT TCGCGCGCTG GGGGGCACAG GGGGCCAGGA CCTTCGGCTT CAACGGCCAT ACCGACGTGG TGCCGCCGGG AGATCCGGCC AGCTGGACGC ATCCGCCCTT TTCCGGGCAC GAGGCCGAGG GCTGGATCTG GGGCCGCGGC GCCACCGACA TGAAATCCGG CGTCGCCGCC TTTGCCGCCG CCGCCATCGG CTTCGTGACC CAGACCCCGC CGCCGGACGG CGCGGTGATC CTGGCCATCA CCGGCGACGA GGAGGGGCCC GGCAAGCACG GCACCCGCGC GCTGCTCGAC TGGATGGCGG CGCGGGGCGA GCGGATGGAT GTCTGCATCG TTGGCGAGCC TTCCAACCCC GACCGCATGG GCGAGATGAT CAAGATCGGC CGCCGCGGAT CGATGACCTT GCAGATCGAG GCGCACGGCA TCCAGGGCCA CGCCGCCTAT CCGCATCGGG CCCGCAACCC GATCCACGCG CTGCTGCGGC TGCTGCACGA GCTGACCGAC GCGCCGCTGG ACGAGGGGAC CGAGCATTTC GATCCCTCGG GATTGCAGGT GACGACGGTC GATTGCGGCA ACCCGGCCTC GAACGTGATC CCGGAACGGG CGCGTGCGGT GATCAACATC CGTTTCAACG ACGCGCATAC GGCCGAAAGC CTCGACCGCA TGATCCGTGC CCGCGCGGCG GCGATCTCGG CCGAGACCAA GGTGGACTTC GCCATCTCGA CCGATGTGTC GGGCGAAAGC TTCCTGACCG CGCCCGGCCC CTTCGTCGAT CTGGTCGCCG GCGTGGTGCG CGAGGAGACG GGGCTGGACC CTGTGCTCTC GACCTCGGGC GGCACCTCGG ATGCGCGTTT CGTCAAGGAT CATTGCCCGG TGCTTGAATT CGGGCTGGTC GGGCATTTCA TGCATCAGGT CGACGAACGC GTGCCGGCCG ACCAGGTCCG CCAGCTTGCC CGCATCTATC GCCGCATCCT GGAGCGTTAC TTCGCATGA
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Protein sequence | MTPIPDPAQL TARLIRCASV TPDEGGALVL LADVLGAAGF ECHRVDREGV PNLFARWGAQ GARTFGFNGH TDVVPPGDPA SWTHPPFSGH EAEGWIWGRG ATDMKSGVAA FAAAAIGFVT QTPPPDGAVI LAITGDEEGP GKHGTRALLD WMAARGERMD VCIVGEPSNP DRMGEMIKIG RRGSMTLQIE AHGIQGHAAY PHRARNPIHA LLRLLHELTD APLDEGTEHF DPSGLQVTTV DCGNPASNVI PERARAVINI RFNDAHTAES LDRMIRARAA AISAETKVDF AISTDVSGES FLTAPGPFVD LVAGVVREET GLDPVLSTSG GTSDARFVKD HCPVLEFGLV GHFMHQVDER VPADQVRQLA RIYRRILERY FA
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