| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_R0040 |
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| Symbol | |
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| ID | 4580681 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1974821 |
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| End bp | 1977663 |
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| Gene Length | 2843 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | 640721042 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.702557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.26513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GATCAAATCA AGCGCGATAA GGGCGTTTGG TGGATGCCTT GGCAGCAAGA GGCGATGAAG
GACGTGATAC TCTGCGATAA GCCATGGGGA GCTGAGAATA AGCTTTGATC CATGGATCTC
CGAATGGGGA AACCCACCTG AAATCCAGTT GTTGTTACCC TCGGGTATCA ACAACCGGGT
TAACCAGGTA CTTATCACCT GAATACATAG GGTTTTAAGA GCGAACCCGG GGAACTGAAA
CATCTAAGTA CCCGGAGGAA AGGAAATCAA CAGATACTCC CCCAGTAGCG GCGAGCGAAC
GGGGACCAGC CGAGCCGTGA GAATGACCAG AATGGCCTGG AAAGGCCAGC CATAGCGGGT
GACAGCCCCG TATGGGAAGT TTGATCGGAC GCATTAAGTA GGGCGGGACA CGTGAAATCC
TGTCTGAAGA TCGGGGGACC ACCCTCGAAG GCTAAGTACT CCTTGCTGAC CGATAGCGAA
CCAGTACCGT GAGGGAAAGG TGAAAAGCAC CCCGACGAGG GGAGTGAAAC AGTTTCTGAA
ACCGGACGCC TACAAGCAGT CGGAGGGGCC TTGCGCCCTG ACGGCGTACC TTTTGTATAA
TGGGTCAACG ACTTGGTCTG TCTGGCAAGC TTAAGCCGTT AGGTGTAGGC GCAGCGAAAG
CGAGTCTTAA AAGGGCGCAT GAGTCAGACG GATCAGACCC GAAACCAGAT GATCTAGGCA
TGAGCAGGCT GAAGGTTGGG TAACACCAAC TGGAGGGCCG AACCCACACC TGTTGAAAAA
GGTCGGGATG ACTTGTGCCT AGGGGTGAAA GGCCAATCAA ATCTGGAGAT AGCTGGTTCT
CCGCGAAAGC TATTTAGGTA GCGCGTCAGA CGAATTCTCC CGGGGGTAGA GCACTGCATG
GATGATGGGG GCCCACAGCC TTACTGAGTC TAAGCAAACT CCGAATACCG GGAAGAACTA
TCTGGCAGAC ACACGGCGGG TGCTAACGTC CGTCGTGGAG AGGGAAACAA CCCTGACCAA
CAGCTAAGGC CCCCAATTCG TGGCTAAGTG GGAAAGCATG TGAGACTTCC AAAACAACCA
GGAGGTTGGC TTAGAAGCAG CCATCCTTTA AAGATAGCGT AACAGCTCAC TGGTCTAATC
AAGAGGTCTT GCGGCGAAGA TGTAACGGGG CTCAAGCCAC GAGCCGAAGC TTTGGGTGTG
CATTTATGCA CGCGGTAGCG GAGCGTTCTG TGATATAGAA CGCTGCCTCC TTAGTATCCT
CGGGTATATT GGAGGCAATG TTCTGACTGT GAAGCCGGGC TGTAAGGCAT CCGGTGGAGT
GATCAGAAGC GAGAATGTTG ACATGAGTAG CGACAAACAG GGTGAGAGAC CCTGTCGCCG
AAAGTCCAAG GGTTCCTGCT TAAAGCTAAT CTGAGCAGGG TAAGCCGGCC CCTAAGGCGA
GGCCGAAAGG CGTAGTCGAT GGGAACCAGG TTAATATTCC TGGGCCAGGA GATGGTGACG
GATCGCAGGT GTAGTTCCTC CTTATCGGAT TGGAGGGGCT GCTGAGCGGT TCCTGGAAAT
AGCCCTCCAC AAGACCGTAC CCTAAACCGA CACAGGTGGA CTGGTAGAGA ATACCAAGGC
GCTTGAGAGA ACCACATTTA AGGAACTCGG CAAAATACCT CCGTAAGTTC GCGAGAAGGA
GGCCCCGTTG GCAGGCAACT GTCGGCGGGG GGCACAAACC AGGGGGTGGC GACTGTTTAC
TAAAAACACA GGGCTCTGCG AAGCCGTAAG GCGACGTATA GGGTCTGACG CCTGCCCGGT
GCCGGAAGGT TAAAAGGAGA GGTGCAAGCC TTGAATTGAA GCCCCGGTAA ACGGCGGCCG
TAACTATAAC GGTCCTAAGG TAGCGAAATT CCTTGTCGGG TAAGTTCCGA CCTGCACGAA
TGGCGTAACG ACTTCCCCGC TGTCTCAAAT GTGGACTCAG CGAAATTGAA TTGTCTGTGA
AGATGCAGAC TTCCCGCGGT TAGACGGAAA GACCCCATGC ACCTTTACTA TAGCTTCGCA
CTGGCATCAG GATTGCGATG TGCAGGATAG GTGGTAGGCG CTGAAACGGG GACGCCAGTT
CCCGTGGAGC CATCCTTGAG ATACCACCCT TCGCACTCTT GATGTCTAAC CGCGGCCCGT
TATCCGGGTC CGGGACCCTG CGTGGTGGGT AGTTTGACTG GGGCGGTCGC CTCCCAAAGA
GTAACGGAGG CGCGCGAAGG TTGGCTCAGA GCGGTCGGAA ATCGCTCGTC GAGTGCAATG
GCAGAAGCCA GCCTGACTGC AAGACTGACA AGTCGAGCAG AGACGAAAGT CGGCCATAGT
GATCCGGTGG TCCCGAGTGG AAGGGCCATC GCTCAACGGA TAAAAGGTAC GCTGGGGATA
ACAGGCTGAT GATGCCCAAG AGTCCATATC GACGGCATCG TTTGGCACCT CGATGTCGGC
TCATCTCATC CTGGGGCTGG AGCAGGTCCC AAGGGTATGG CTGTTCGCCA TTTAAAGAGG
TACGTGAGCT GGGTTTAGAA CGTCGTGAGA CAGTTCGGTC CCTATCTGCC GTGGGTGTAG
GATACTTGAG AGGAGTTGCC CCTAGTACGA GAGGACCGGG GTGAACGTTC CACTGGTGGA
CCAGTTATCG TGCCAACGGT AGTGCTGGGT AGCTATGAAC GGACAGGATA AACGCTGAAG
GCATCTAAGC GTGAAGCCCC CCTCAAAACA AGGTATCCCT TGAGAGCCGT GGAAGACCAC
CACGTCGATA GGCCGGAGAT GTAAGCGCAG CAATGCGTTC AGTTGACCGG TACTAATCGC
TCGATTGGCT TGATTTGATC CGG
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| Protein sequence | |
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