Gene Pden_2830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2830 
Symbol 
ID4581161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2848678 
End bp2849277 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content66% 
IMG OID639770157 
Productmolybdopterin oxidoreductase Fe4S4 region 
Protein accessionYP_916610 
Protein GI119385554 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.156041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.610835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG ACCTCTCGCG GCGCGGTTTC CTGAAACTGG CGGGTGCGGG TGTCGCGGCG 
ACATCGCTGG GGGCCATGGG CTTCGGCGGA GCCGAGGCGG CGGAACAGGC GCATGTGCGC
GCCTTCAAGC TGGCCTCGAC GACCGAGACG CGCAACACCT GCCCCTATTG CTCGGTGGCC
TGCGGCATCA TCATCTATTC GGACGGCGAC CTGAAGGCCG GCGAAGAGGC CAAAGTGGTG
CATATCGAGG GCGATGCGGA CCACCCGACC AACCGCGGCA CGCTTTGCCC GAAAGGCGCG
GCGCTGAAGG ATTTCGTCAA TGCCGAGACG CGGCTGACCA CGCCCCGCAT TCGCCGCCCC
GGCGCGGCGA GCTTCGAGGA GATTTCCTGG GAAGAGGCGC TGGACAAGAT CGCCCGCGCA
CTCAAGGACG ACCGCGACGC CAACATGGTG CTGACCAACG ACGACGGCGT GCCCGTCAAC
CGCTGGACCA CCACCGGCTA TCTGGCGGCC TCGGCCACCA CCAATGAAAC CGCATGGCTG
ACCTACAAGG TGGTCAGGTC CATGGGGATC GTCGGATTCG ACAACCAGGC GCGCGTCTGA
 
Protein sequence
MNIDLSRRGF LKLAGAGVAA TSLGAMGFGG AEAAEQAHVR AFKLASTTET RNTCPYCSVA 
CGIIIYSDGD LKAGEEAKVV HIEGDADHPT NRGTLCPKGA ALKDFVNAET RLTTPRIRRP
GAASFEEISW EEALDKIARA LKDDRDANMV LTNDDGVPVN RWTTTGYLAA SATTNETAWL
TYKVVRSMGI VGFDNQARV