Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2830 |
Symbol | |
ID | 4581161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2848678 |
End bp | 2849277 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639770157 |
Product | molybdopterin oxidoreductase Fe4S4 region |
Protein accession | YP_916610 |
Protein GI | 119385554 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.156041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.610835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATATCG ACCTCTCGCG GCGCGGTTTC CTGAAACTGG CGGGTGCGGG TGTCGCGGCG ACATCGCTGG GGGCCATGGG CTTCGGCGGA GCCGAGGCGG CGGAACAGGC GCATGTGCGC GCCTTCAAGC TGGCCTCGAC GACCGAGACG CGCAACACCT GCCCCTATTG CTCGGTGGCC TGCGGCATCA TCATCTATTC GGACGGCGAC CTGAAGGCCG GCGAAGAGGC CAAAGTGGTG CATATCGAGG GCGATGCGGA CCACCCGACC AACCGCGGCA CGCTTTGCCC GAAAGGCGCG GCGCTGAAGG ATTTCGTCAA TGCCGAGACG CGGCTGACCA CGCCCCGCAT TCGCCGCCCC GGCGCGGCGA GCTTCGAGGA GATTTCCTGG GAAGAGGCGC TGGACAAGAT CGCCCGCGCA CTCAAGGACG ACCGCGACGC CAACATGGTG CTGACCAACG ACGACGGCGT GCCCGTCAAC CGCTGGACCA CCACCGGCTA TCTGGCGGCC TCGGCCACCA CCAATGAAAC CGCATGGCTG ACCTACAAGG TGGTCAGGTC CATGGGGATC GTCGGATTCG ACAACCAGGC GCGCGTCTGA
|
Protein sequence | MNIDLSRRGF LKLAGAGVAA TSLGAMGFGG AEAAEQAHVR AFKLASTTET RNTCPYCSVA CGIIIYSDGD LKAGEEAKVV HIEGDADHPT NRGTLCPKGA ALKDFVNAET RLTTPRIRRP GAASFEEISW EEALDKIARA LKDDRDANMV LTNDDGVPVN RWTTTGYLAA SATTNETAWL TYKVVRSMGI VGFDNQARV
|
| |