| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2827 |
|---|
| Symbol | |
|---|
| ID | 4581158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2844513 |
|---|
| End bp | 2845199 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639770154 |
|---|
| Product | formate dehydrogenase, gamma subunit |
|---|
| Protein accession | YP_916607 |
|---|
| Protein GI | 119385551 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.501112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.39802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAC GCATGTTCTC GCAACCGGGC GACCATATCG AAAGCCGGCA TCCGGTCACG
GTCAGCCGCT ATCGCGGCAT CACCCGGCTG AACCACTGGG TGACGGCGGC CAGCCTGATC
GTGCTGCTGC TTTCGGGGCT GGCGCTGTTC CACCCCTCGC TCTACTTCCT GACCGGGCTG
TTCGGCGGCG GGCAGACGAC GCGCTGGCTG CATCCCTTTG TCGGCGTGCT GCTGTTCTTC
AGCTTCCTGT TGCTGTTCTT GCAGATGTGG CGGCTGAACC TGCCCCGCCC CGAGGATCGC
ACCTGGGTCA GCCATATCGG CGAGGTCGTC CGCGGCGAAG AGGAGAAACT GCCCGAGCTT
GGCAAATACA ATGCCGGGCA GAAATTCGTC TTCTGGGCCA TGTCGGTGCT GATCGCGGTG
CTGATCGTGT CGGGCGTGAT GATCTGGCAG CAATATTTCC CCGACCTGGT CTCGATCCCG
GTGCGGCGCT GGGCGGTGCT GATCCATGCG CTGGCGGCGG TGGCGATCAT TCTGACCTTC
ATCCTGCACG TCTATGCGGC GATCTGGACG CGGGGCACCA TCCGCGCCAT GACGCGCGGC
ACGGTGACCG GCGGCTGGGC CTGGCGGCAC CATCGCAAAT GGCTGCGCGA ACTGGCTGGA
CGCGAGGGAG GCGGCCCGGC AGAGTAG
|
|---|
| Protein sequence | MPKRMFSQPG DHIESRHPVT VSRYRGITRL NHWVTAASLI VLLLSGLALF HPSLYFLTGL
FGGGQTTRWL HPFVGVLLFF SFLLLFLQMW RLNLPRPEDR TWVSHIGEVV RGEEEKLPEL
GKYNAGQKFV FWAMSVLIAV LIVSGVMIWQ QYFPDLVSIP VRRWAVLIHA LAAVAIILTF
ILHVYAAIWT RGTIRAMTRG TVTGGWAWRH HRKWLRELAG REGGGPAE
|
|---|
| |