| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2820 |
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| Symbol | |
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| ID | 4581399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2837634 |
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| End bp | 2838227 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770146 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_916600 |
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| Protein GI | 119385544 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.682095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGATC GAAAATCGGC GCGAACCGCC CGTTCCGGCG CCCATGGCGA TCCTCGGGAC
GAGCTGGTCG ATCATCTGCC GGCGTTGCGC GCATTCGCGC TGTCGCTGAC GCGCGAGGGG
GCCTCGGCCG ACGACCTGGT GCAGGACACC ATCGTCAAGG CCTGGACCCA TATCGACAAG
TTCCAGCCCG GCACCAACCT GCGGGCCTGG TTGTTCACCA TCCTGCGCAA CACCTTCTAT
TCCGCCCGCC GCAAGACCAA GCGCGAGGTC AGCGATACCG ACGGGGTCCA TGCCGCCCGT
CAGGCCACCC GGCCCGAACA TGACGGCCGC CTGGCGCTGA ACGATTTCCG CGCCGCCTTC
GAGCAATTGC CCGACGAGCA GCGCGAGGCG CTGATCCTGG TGGGCGCCTC GGGCTTTTCC
TATGAGGAAG CGGCGGCGAT GACCGGGGTC GCCGTGGGCA CCGTCAAGTC GCGCGCCAAT
CGCGGCCGCC GCCGGCTGGC CGAGCTTCTG CAACTGGAGG AGGGCGAGGA GCTGGAGATG
ACCGACCGCG CCACGCTGGC GGTGATGGCG CAGAACACCC CGATCCTGCG CTGA
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| Protein sequence | MTDRKSARTA RSGAHGDPRD ELVDHLPALR AFALSLTREG ASADDLVQDT IVKAWTHIDK
FQPGTNLRAW LFTILRNTFY SARRKTKREV SDTDGVHAAR QATRPEHDGR LALNDFRAAF
EQLPDEQREA LILVGASGFS YEEAAAMTGV AVGTVKSRAN RGRRRLAELL QLEEGEELEM
TDRATLAVMA QNTPILR
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