Gene Pden_2805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2805 
Symbol 
ID4581384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2825886 
End bp2826512 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID639770131 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_916585 
Protein GI119385529 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.164797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTGGG ACACCTTGGC GAATTTTCCG CTGCAGCAGT TGCTGGCCTT CATGGCCGGG 
GCATTGGTGC TGAACCTGGC GCCGGGGCAG GACGTGTTCT TCGCCAGCGC CTGCGGCATC
CAGAACGGCC CGCGCGCCGG GGCTTTGGCC GGCTTCGGCG TCGGGCTGGG CGTGATCTGC
CATGTGGCGA TGGCGACCGT GGGCCTTGGT GCGCTGGTGG CCGCCCATCC CGGCGCGCTG
GTTGCGATCA AATATGCCGG CGCGGCCTAT CTGCTGTTCC TGGCCTGGAA AAGCTGGAAC
GCGGGCGAGG TCGATCCCCG CGCCCGCGCC GCCAGCCGGC CCTGGAACAT CATCCGGCGC
GGGGCGCTGT CGAACCTGCT GAACCCCAAG CCGGTGCTGT TCCTGCTGGC TTTCCTGCCG
CAATTCACCA AGCCGGAATA TGGCCCGATC TGGCAGCAGA TCCTGGGGCT GGGGCTGATG
TTCACCCTGT CCGGCACGCT GGTCACCATG GGTTACGGGG TGGTCGGCGG GTTGGCCGGC
CAGGTGATCG GCAAGCGGCT GGGCATCGTG AACCGCATTG CGGCGGTGAT GTTCGCGGGC
CTTGCCCTGC GGCTGGTCTG GAAATGA
 
Protein sequence
MIWDTLANFP LQQLLAFMAG ALVLNLAPGQ DVFFASACGI QNGPRAGALA GFGVGLGVIC 
HVAMATVGLG ALVAAHPGAL VAIKYAGAAY LLFLAWKSWN AGEVDPRARA ASRPWNIIRR
GALSNLLNPK PVLFLLAFLP QFTKPEYGPI WQQILGLGLM FTLSGTLVTM GYGVVGGLAG
QVIGKRLGIV NRIAAVMFAG LALRLVWK