Gene Pden_2779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2779 
Symbol 
ID4581358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2800682 
End bp2802070 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content71% 
IMG OID639770105 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_916559 
Protein GI119385503 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATCA ATGCAAAAGC CCGTCCCCCA ACAGAAAGAC CCAGCGTGCC ATTCGGCCTT 
GTTTCCCACC GCATCGACCT TTTTCCCGGC CAGCCGGCCC CCGAGCCGAT CCGCCTGCGC
ACCCTGATCC TGTTGCGCTG GGTGGCGATC GCGGGCCAGT TGGCGGCCGT GGGCGTCGCG
CTGCTGATCG GAGCCGGCTT CCCGCTGGCG GCGGTGCTGG CGGTGATCGG GCTGGCGGTG
GCGCTGAACC TGGCGCTGAC GGCGCGGCCG GACCGGCGCA TCTCGGCACG CGAGGCGGCC
TGGCAGCTGG GTTTCGACCT GGGGCAGGTG GCGGCCTTGC TGGCGCTGAC CGGCGGGCTT
GCCAATCCCT TCGCGTTGCT TTTGCTGGTG CCGGTGACGG TCGCGGCGAC CGCCCTGCCG
CCCCGGCATT TGCTGGCGCT GGGCGCCGCC ACCTTCCTGA TGGTGACGCT GGCGGCGGTC
TGTGCCCAGC CGCTGACCTT CGGGTCGGGC GGGCTGGTCA CGCTGCGCGA GCCGCTGCTG
GTCGGGCACT GGTTCGCCAT CGTGATCGGC GCGGTGTTCT TTTCCGGCTA TGCCCGGCTG
GTCGCCGCCG AGGTCAGCGC CACCTCGGAT GCGCTGTTCG CCGCCCGCCT GGCACTGGAG
CGGGAACAGA GGCTGCAACA TCTGGGCGGC GTGGTCGCCG CCGCGGCGCA TGAACTGGGC
ACGCCGCTGG CCACGATCAA GCTGGTCGGC GCCGAACTGG CCGACGAACT GGCCGAGGCC
CTGCCCGAGC GCGAGGATCT GGCCGAGGAT GTCACCTTGC TGCGCCAGTC GGCGGACCGT
TGCCGCGACA TCCTGAAATC CATGGGCAGC GCCGGGCGCG ACGACCTGCT GATCCGCTCG
GCTCCGCTGA TCGAGGTGCT GGCCGAGGCC GCTGCGCCCC ATCACGGACG CGGCGCCGAG
ATCGTGGTGC TGCCCGCCTC CGAGCCGCTG ATCGTCCAGC GCGATGCCGC CGTGATCCAC
GGGCTGCGCA ACCTGATCCA GAACGCCGTC GATTTCGCCG CCCGCAGCGT GACCGTCGAG
ACCGGCGCCG ACCGCCGCGA TCTTTGGGTG CGGGTCGCCG ATGACGGGCC GGGCTTTCCG
CCCGCGCTGT TGCCGCGCAT CGGCAGCCCC TTCCTGACCA CCCGCCCCCG GGCCGAGGAC
GGGCGCAGCT ATGAAGGCAT GGGCCTGGGC CTGTTCATCG CCAAGGCGCT GCTGGAGCGC
TCGGGCGCGC GGCTGCGCTT TGCCAATAGG GCAGAGGGCG GTGCCGAGGT CGTCGTCACC
TGGCCGCGCG AGGTGATCGA GACCGGGAAT CGCGCGCCGC TTGGGCCGAA CCCCGAGATA
CTGGCCTGA
 
Protein sequence
MGINAKARPP TERPSVPFGL VSHRIDLFPG QPAPEPIRLR TLILLRWVAI AGQLAAVGVA 
LLIGAGFPLA AVLAVIGLAV ALNLALTARP DRRISAREAA WQLGFDLGQV AALLALTGGL
ANPFALLLLV PVTVAATALP PRHLLALGAA TFLMVTLAAV CAQPLTFGSG GLVTLREPLL
VGHWFAIVIG AVFFSGYARL VAAEVSATSD ALFAARLALE REQRLQHLGG VVAAAAHELG
TPLATIKLVG AELADELAEA LPEREDLAED VTLLRQSADR CRDILKSMGS AGRDDLLIRS
APLIEVLAEA AAPHHGRGAE IVVLPASEPL IVQRDAAVIH GLRNLIQNAV DFAARSVTVE
TGADRRDLWV RVADDGPGFP PALLPRIGSP FLTTRPRAED GRSYEGMGLG LFIAKALLER
SGARLRFANR AEGGAEVVVT WPREVIETGN RAPLGPNPEI LA