Gene Pden_2772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2772 
Symbol 
ID4581351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2792380 
End bp2793573 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID639770098 
Productmajor facilitator transporter 
Protein accessionYP_916552 
Protein GI119385496 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAT TGCTGTCGGG GGGGATCATC AGCCTGATCC TGGCCTATAC GCTCAGTCAG 
TTCTATCGCG CCTTCCTGGC CGTGCTGTCG CCGGTCCTGC AGGCTGAACT GGGCGCGGGG
CCCGAGGATC TGGCGATTTC CTCGGGCATG TGGTTCCTGA CCTTCGCGCT GATGCAGATC
CCCATCGGCG GGGCGTTGGA CCGCATCGGC CCGCGCCGCA CGGTGGCCGT GCTGCTGGCC
CTGGGCGGCG CGGGCGGGGC GGCGGTCTTT GCGCTGGCGC AGGCGCCGTG GCATCTGCAT
GTCGCGCTGG CGCTGATGGG GATCGGCTGC GCGCCGGCGC TGATGGGCAG CTATTACATC
TTTGCCCGCA ACTATCCTAC GGCGCTGTTC GGGACATTGG CCGGGGCGGC GGTGGGCTTC
GGCTCGCTGG GCAATATCCT GGGCGCCGCG CCGCTGGTCT GGGCGACCGA GGCCTTCGGC
TGGCGCGAGA CGCTATGGGC GCTGGCCGCG GTCACGCTGG CGGTGGCGCT GGCGATCCTG
GCCTTTACCC GCGACCCCGA GCGGCTGGCC GCCACCGCGC CGCGCGGATC GCTGGCCGAG
ATCCTGCGGC TGCGGCCGCT ATGGTTCATC CTGCCGCTGT TTTCGGTGAA CTATGCCGCC
TCGGCCGCGA TCCGCGGCCT TTGGGCCGGC CCCTACATGG CCGAGGTGCA TGGCGCCTCG
GACCAGTTGA TCGGCTGGGC GACGCTGGCG ATGGGCGTCG CCATGGTGGT CGGCAATTTC
CTGGTCGGGC CGGCGACGCG GCTGGTGGGC TCGATCCGCA GGCTGGCGCT GATCGCCAAC
GGCGCCGGCG TGGCGGTGAT GGCCGGGCTG TGGCTGTTTC CCGCCGAGGG CGTCGCGCTG
TCGGTGGCAT TCCTGGCTCT GGTCGGGCTG TCGGGTGCGA CCTATACCGT GCTGATGGCG
CATGGCCGCG CCTTTCTGCC CCCGCATCTG GTGGGGCGGG GCGTGACCTT CCTCAACATG
TTCTCGATCG GCGGGGCAGG GGTGCTGCAA TTCACCTCGC GCCCGGTCTA TCGCTGGGCC
AGCGCGCAAG GCAGCGCGGC CGAGGCATAC TCGACCCTGT TCCTGTTCTT CCTGATTCCG
CTTACGGTGG GGTTCCTGCT GTATTTCCTG ACGCCCGAGA CGCCCGATGC CTGA
 
Protein sequence
MRALLSGGII SLILAYTLSQ FYRAFLAVLS PVLQAELGAG PEDLAISSGM WFLTFALMQI 
PIGGALDRIG PRRTVAVLLA LGGAGGAAVF ALAQAPWHLH VALALMGIGC APALMGSYYI
FARNYPTALF GTLAGAAVGF GSLGNILGAA PLVWATEAFG WRETLWALAA VTLAVALAIL
AFTRDPERLA ATAPRGSLAE ILRLRPLWFI LPLFSVNYAA SAAIRGLWAG PYMAEVHGAS
DQLIGWATLA MGVAMVVGNF LVGPATRLVG SIRRLALIAN GAGVAVMAGL WLFPAEGVAL
SVAFLALVGL SGATYTVLMA HGRAFLPPHL VGRGVTFLNM FSIGGAGVLQ FTSRPVYRWA
SAQGSAAEAY STLFLFFLIP LTVGFLLYFL TPETPDA