| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2750 |
|---|
| Symbol | |
|---|
| ID | 4580385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2769202 |
|---|
| End bp | 2770044 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639770076 |
|---|
| Product | SMP-30/gluconolaconase/LRE domain-containing protein |
|---|
| Protein accession | YP_916530 |
|---|
| Protein GI | 119385474 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC AGGTCTTCGA CCCCCGCATC TGCGAGCTGG GCGAAGGCGC CTTCTGGCAT
CCTGAGCGCG CCCAGCCCTT CTGGTTCGAC ATCCTCGGCC GCCGGCTCCT GTCGCGGCAG
GACGGGGCCG AGCTGGAATG GCGCTTCGAC GAGATGGTCT CGGCCGCCGG CTGGATCGAC
CGCGACCACC TGCTGATCGC CAGCGAAACC GCGCTCATCC GCTTCGACCT GCGCGACGGC
CGGCAGGAAC GGCTGGTCGC ACTGGAAGCC GACCGGCCCG GCAACCGCTC GAACGACGGG
CGGGCCGATC CTTTCGGCGG CTTCTGGCTC GGCACGATGG CACGCGATGC CAAGGCTGGA
AAAGGCGCGA TCTATCGGTA TCTTGAAGGA GAGCTACGCC TGCTGCGGGG AAACATGTCC
ATCCCGAACG CGATCTGCTT TTCTCCTGAC GGGCGCCGGG CCTATTTCGC CGACACCGCC
GCCCAGACTG TCTGGTCGCA GGACCTGGAC GAGCGGGGCT GGCCCCGCAC CGAGGCCCGC
GTCTTCCTGG ACCTGGCCGG CACCGACCAA TTCCCCGACG GCGCCGTCAC CGACGAGCAG
GGCCGGTTCT GGAACGCGCG CTGGGGCAGC GGCTCGGTCG CCTGCCATGC CCCGGACGGC
AGCCTGCTTC GCCGCCTGAC CCTGCCAGCC AGCCAGCCCA GTTGCCCGGC CTTCGCCGGC
CCGGATCTTT CGCAGCTAAT CGTGACCAGC GCCGCCGAGG GCCGGCACGG TCCCGAGGAT
GGCCGCACCT GGCTTCTGGA TCCGGGCACC CGGGGCCGGC CAGAGCCGCG GGTCAAGGCA
TGA
|
|---|
| Protein sequence | MSAQVFDPRI CELGEGAFWH PERAQPFWFD ILGRRLLSRQ DGAELEWRFD EMVSAAGWID
RDHLLIASET ALIRFDLRDG RQERLVALEA DRPGNRSNDG RADPFGGFWL GTMARDAKAG
KGAIYRYLEG ELRLLRGNMS IPNAICFSPD GRRAYFADTA AQTVWSQDLD ERGWPRTEAR
VFLDLAGTDQ FPDGAVTDEQ GRFWNARWGS GSVACHAPDG SLLRRLTLPA SQPSCPAFAG
PDLSQLIVTS AAEGRHGPED GRTWLLDPGT RGRPEPRVKA
|
|---|
| |