Gene Pden_2749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2749 
Symbol 
ID4580384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2768603 
End bp2769205 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content72% 
IMG OID639770075 
Product2-dehydro-3-deoxy-6-phosphogalactonate aldolase 
Protein accessionYP_916529 
Protein GI119385473 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC CCATCATCGC CATCCTGCGC GGCCTGACCC CGGCCGAGGC CCTGCCCGTC 
GCCCGCGCCC TGGTCGCTTC CGGCATCGAC CGGATCGAGG TGCCGCTGAA CTCGCCCGAT
CCGCTGGACA GCATCCGGCT GATGGCAGCG GCACTGGACG GACAGGCGAC CATCGGCGCC
GGAACCGTGC TGACGGTGGA CCAGGTCGCG CAGGTGGCCG ATGCGGGCGG GCGGATGATC
GTCTCACCCA ACACCGATCC GGCGGTGATC CGCGAGACGA GGGCGCGCGG CCTGCAATCC
TGGCCCGGCG TCTTTACCGC CACCGAATGC TTTGCCGCCA TCGCCGCCGG TGCGACCGGG
CTGAAGCTGT TTCCCGCCGA CCAGGCCGGC ACCGGCATGC TGAAGGCGCT GCGCGCGGTA
CTGCCGCCCG ACCTGCCGGT CTATGCCGTG GGCGGTGCCG GCCCGGGGAA TTTCGTCGAA
TGGCTGGACG CCGGGGCGCA GGGCTTCGGC ATCGGCAGCG CGCTCTATCG TCCCGGCGAC
GGGCCCGAGA CAGTTGGCGC CCGCGCGCGC GAAATCGTGG CGGCGCTGCG GGCCTGCGCA
TGA
 
Protein sequence
MTQPIIAILR GLTPAEALPV ARALVASGID RIEVPLNSPD PLDSIRLMAA ALDGQATIGA 
GTVLTVDQVA QVADAGGRMI VSPNTDPAVI RETRARGLQS WPGVFTATEC FAAIAAGATG
LKLFPADQAG TGMLKALRAV LPPDLPVYAV GGAGPGNFVE WLDAGAQGFG IGSALYRPGD
GPETVGARAR EIVAALRACA