| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2726 |
|---|
| Symbol | |
|---|
| ID | 4580361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2745472 |
|---|
| End bp | 2746125 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639770052 |
|---|
| Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| Protein accession | YP_916506 |
|---|
| Protein GI | 119385450 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.191088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATT TCGCGCAGCG CCGCACCATG ATGGTCGATA CTCAGGTTCG TCCGAACGAA
GTGACCAGCT ATCCCGTGAT CGAGGCGATG CTGAACGTCC CGCGCGAGCA GTTCGTCCCC
GAATCGCGCC GGGATGTCGC CTATGTCGGC AACAATATCG ACCTTGCCCC CGGCCGCGTG
CTGCTGGAGC CGCGCACGCT GGGCAAGATG ATGGATATCC TGAACCTGCA GAACGGCGAC
CTGGTTCTGG ATGTCGGCTG CGGCTACGGC TATTCCGCCG CGGTCATGGC CCGCATCGCC
GAGGCCGTCG TCGCCGTCGA GGAGGATGCC GCGATGGCTG CCGAGGCGGA AGGCCGGCTG
GCCGCGCAGG ACGTGTTCAA CGTCGCCGTC GTCCAGGGCG CGCTGGCCGA GGGCTGCCCC
GGCCAGGCCC CCTATGACGC CATCCTGATC GAAGGCGCGG TCGAGCAGGT GCCCGAGGCG
CTGACCGAGC AACTGCGCGA GGGCGGCCGC ATCGTCGCCC TGTTCCGCGA GGGCAATCTG
GGCATCGTCC GCCTTGGCCA CAAGCTGGAC GGGCGCGTGA ACTGGCGCTT TGCCTTCAAT
GCCGTCGCCC CGCTGCTGCC GGGCTTTGCG CGCCCGCGGG GCTTCGTCTT GTGA
|
|---|
| Protein sequence | MTDFAQRRTM MVDTQVRPNE VTSYPVIEAM LNVPREQFVP ESRRDVAYVG NNIDLAPGRV
LLEPRTLGKM MDILNLQNGD LVLDVGCGYG YSAAVMARIA EAVVAVEEDA AMAAEAEGRL
AAQDVFNVAV VQGALAEGCP GQAPYDAILI EGAVEQVPEA LTEQLREGGR IVALFREGNL
GIVRLGHKLD GRVNWRFAFN AVAPLLPGFA RPRGFVL
|
|---|
| |