Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2717 |
Symbol | |
ID | 4580352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2733238 |
End bp | 2733921 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639770043 |
Product | lipoprotein signal peptidase |
Protein accession | YP_916497 |
Protein GI | 119385441 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.702732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGA CCGCGACCCC CAAGCCGCGG AAAAGCCCGG CGGCCCGGAA GCGGCGCTCG AAAAAGCCGC CGCCGCGTGT CTGGCGCAAT GTCTCGCTGG TGGCGGGATT GGTCTTTCTG CTGGACCAGG CGCTGAAATA CCTGGTCGTG CATGTGCTGC GGCTGGACCA GCTGCGCGAG ATCGACGTGA TCGACCCCTG GCTGAACCTG CGCATGGCCT GGAACCAGGG CATGAACTTC GGCCTGTTCG CCAGCGATGT CGAGGTGATG CGCTGGGTGC TGATCGGGAT CGCGCTGGCC GTCTGCCTTT GGGTCGGGAT CTGGATCGGG CGGGCCAAGC CCTCGCGGTT TGCGCAGGTT TCGGCCGGGT TGCTGATCGG CGGGGCGCTG GGCAACGTCG TGGACCGGCT GACCTATGGC GCGGTCGCGG ACTTCCTGAA CATGTCGCTG CCGGGCTGGC GCAACCCCTA CAGCTTCAAC GTGGCCGACA TCGCGATCTT CCTGGGCGCG ATGGGGCTGG TGCTGCTGCC GCCGGAAAAG AAGCCGGCGG CGAAAAGGCG CAAGACGTCT GCCAGGCCGC GCCCGGCGAA ATCCCGCGCG CCCGACGCCC CGTCGGAGCC CGAGGGGCAG GGCGAGCTGG CGCTGGACGA CAAGACCCGT GACGAGGCCG GCAATACGCG CTAA
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Protein sequence | MAETATPKPR KSPAARKRRS KKPPPRVWRN VSLVAGLVFL LDQALKYLVV HVLRLDQLRE IDVIDPWLNL RMAWNQGMNF GLFASDVEVM RWVLIGIALA VCLWVGIWIG RAKPSRFAQV SAGLLIGGAL GNVVDRLTYG AVADFLNMSL PGWRNPYSFN VADIAIFLGA MGLVLLPPEK KPAAKRRKTS ARPRPAKSRA PDAPSEPEGQ GELALDDKTR DEAGNTR
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