Gene Pden_2696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2696 
Symbol 
ID4581241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2712587 
End bp2713927 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content63% 
IMG OID639770025 
Producthypothetical protein 
Protein accessionYP_916479 
Protein GI119385423 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCT CATCTGCCCT CAGCGCCGGG GTGTCCGGGC TCGCCGCCAA TTCGACGCGC 
CTGGCCACCA TCTCCGACAA TATCGCGAAC TCCGGCACCT ATGGCTACAA GCGGGTGGAC
ACCAGTTTTG AAAGCATGGT GATCAACCAG GGCCGCGGCG GCGGGCTTTA TACCGCCAAC
GGGGTCCGCG CCGCCACCAG CCGGATAGTC GATGAGCGCG GCAACCTGGT TCCCACCTCG
CATCCGCTGG ACATTGCGAT TTCAGGGCGG GGGATGCTTC CGGTCATATA TTCCGCATCC
CTGGATTCAG GGACGGCCAC GTCAAGCGAC CTGGTGATGA CCAGAACCGG CTCGTTTCGC
ACCGACGACC AGGGCTACCT GCGCACCGAT TCCGGTCTGG TGCTGATGGG CTGGCCGGCC
AACTCCGACG GCACGATTCC CAGCCAACCG CGAGATTCCA CGACCGGCCT GCAACCGATC
ATGATCAGTC CCAGCCAAAC CGCGGCAGAC CCGACGACCC GGATCAACCT GCGCGTGAAC
CTGCCCGCCG GCGAAGCGGT CGGCGGTGCC ACCGGCACCG AACGCGAGAT GGAGGTCGAA
TATTTCGGCA ATCTCGGCAA TTCCGAAAGA ATGACCGTCA CCTTCAGGCC GGACATCACC
GGCGCTGCCG GGGCTCAGAC GAATCGCTGG ACGATGGAAA TCCGCGACTC GGCGATCATC
AACGATCCGG CCACGCCCGC CGACGAATCC CTGATTGGCA TCTATACGCT GGAATTCGAC
AACAGCCAGG CCGGCGGCGG CACCCTTGCG AATGTCACGA CGGCGGCCGG TGGCGCCTAT
AGCGCGGCAA CAGGCCTGCT GACGGTTCCC GGCGCGAACG GCCCCATGAC CATCAATCTG
GGCCGATATG GCGACAACCA GGGGATCACG CAGCTCAGCG CCAGCTTTTC CCCCACCAAT
GTCAGCAAGA ACGGCTCACC CGTCGGCAAC CTGACCGCGC TTGAGATCGA CGAGAACGGC
TATCTCCAGG CCACCTACGA CACGGGCTTC ACACGGACCC TGTATCAGGT GCCGCTGGTG
GATGTTCCCA ATCCGAACGG CCTGATCGCA ATGGACAACC AGACCTACAA GATCTCGCCC
CGATCCGGCG CGTTCTATCT CTGGAATGCC GGCGATGGCC CCACCGGAGC CGTCGCGGGC
TATGCACGCG AAGCATCGAC GACCGATGTC GCGGCCGAGC TGACCGACCT CATCCAGACC
CAGCGCGCCT ATACGTCAAA CGCCAAGGTC ATCCAGACCG TCGATGAGAT GCTGCAGGAA
ACGGCCAATC TCAAACGCTG A
 
Protein sequence
MSISSALSAG VSGLAANSTR LATISDNIAN SGTYGYKRVD TSFESMVINQ GRGGGLYTAN 
GVRAATSRIV DERGNLVPTS HPLDIAISGR GMLPVIYSAS LDSGTATSSD LVMTRTGSFR
TDDQGYLRTD SGLVLMGWPA NSDGTIPSQP RDSTTGLQPI MISPSQTAAD PTTRINLRVN
LPAGEAVGGA TGTEREMEVE YFGNLGNSER MTVTFRPDIT GAAGAQTNRW TMEIRDSAII
NDPATPADES LIGIYTLEFD NSQAGGGTLA NVTTAAGGAY SAATGLLTVP GANGPMTINL
GRYGDNQGIT QLSASFSPTN VSKNGSPVGN LTALEIDENG YLQATYDTGF TRTLYQVPLV
DVPNPNGLIA MDNQTYKISP RSGAFYLWNA GDGPTGAVAG YAREASTTDV AAELTDLIQT
QRAYTSNAKV IQTVDEMLQE TANLKR