Gene Pden_2655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2655 
Symbol 
ID4581200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2662879 
End bp2665974 
Gene Length3096 bp 
Protein Length1031 aa 
Translation table11 
GC content66% 
IMG OID639769984 
Productacriflavin resistance protein 
Protein accessionYP_916438 
Protein GI119385382 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.29011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC GCGGCTTCAA CCTGTCCGAC TGGGCTCTGC ATCACCGTTC CCTGGTGTGG 
TTCCTGCTGA TCATCTCGAT GGTGGCAGGC ACGCTCAGCT ATCTGCGCCT CGGCCGCGAG
GAGGATCCGA ATTTCACCAT CAAGATCATG GTGATCAGCG CCTCGCTGCC CGGCGCCACC
ATCGAGGACA CGCTGAACCA GGTTACCACG CGGATCGAGA CCAAGCTTGA GGAACTAGAC
GAGCTGAAAT TCACCCGCTC GGTCACCATG CCGGGCCAGT CGGTGGTCTA CCTGGAGCTT
GACCCGACGA TCCGCGGCCC GCAGGTGCCC GAGGTCTGGA AGCGCGTGCG CAACATGATG
TCGGACATCC GCCCGGAATT TCCGCAGGAA TTCCAGGGCT TCCAGTTCAA CGACGATTTC
GGCGACGTGT TCGGCAATAT CTATGCCTTC ACCTCGGACG GCTTTACCCA GCGCGAATTG
CGCGACCGGG TCGAGGATAT CCGCAAACAG GTCCAGGCGC TGCCGATGGC AGGCAAGACC
CAGCTTCTGG GGGTGCGCAA GGAACAGATC TACCTGGAAT TCTCCTCGGC GCGGCTGGCG
GCTCTGGGGC TGAACCACAA CCAGGTGGTG CAGACACTGG CGCTGCAAAA CGCGATCTCT
CCCTCAGGCA TCGTGCAGGC CGGGCCGGAA CAGGTGCTGG TGCGCGTGGG CGGGCAGTTC
GACGACGCCC AATCGATCGC GGCGGTGAAC CTGCGGGTCG GCGACCGTTT CTTCAACATC
GGCGACGTGG CCACCGTCAC CCGCGGCTAC GAAGACCCGC CAAGCGCGCT GTTCCGCTAT
AACGGCAAGG AGGCCGTCGG CCTTCAGATC GGCATGCGCG AGGGCGGCAA CATCCTGGAA
TTCGGCCAGC ACGTCGATGC GCTGATGGCC GAGGTGGCGC GCGGCCTGCC CATCGGGATC
GAGATGGCGA AGTTCGCCGA CCAGCCGCAT GTGGTGGACG AGGCCGTCGG CCATTTCGTC
CAGGCCCTCG CCGAAGCGGT GGCCATCGTG CTGCTGGTCA GCTTTGTCAG CCTGGGCCTG
CGCGCCGGCT TCGTGGTGAC GCTGACCATC CCGCTGGTTC TGGCGATCAC CTTCGTGATC
CTGGACATCT ATGGCATCAC GTTGCAGCGG ATCTCGCTCG GGGCGCTGAT CATCGCCCTG
GGACTGCTGG TCGACGACGC GATGATCGCC ATCGAGACGA TGATCTCGCG GCTGGAGGTC
GGCGACAGCC TGGAACGCGC CGCCAGCCAT GCCTGGAGTT CCATCGCCTT CCCGATGCTG
ACCGGCACGC TGGTGACGGT GGCGGGCTTC ATCCCCATCG GGCTGAACAG TTCGGCAGCG
GGCGAGTTTA CCTTTTCGCT TTTCGTGGTG ATCGCCGTCT CGCTGATCGT CAGCTGGATC
GTCGCCGTGC TGTTTGCGCC GCTTCTGGGC GTCACCATGC TGCCCGCGAC CATGGTGCAT
AAATCCGAGC GGCCGAGTTG GCTGCGCCGG CGGTTCCACG GCCTGCTCCT GTGGGGCATG
CACCACAAAT GGCTGACCAT CGCCGTCACC CTGGCCGTGT TCGCGATTTC GGTGGTGGGA
ATGCGCTTCG TCGAGCAGCA GTTCTTTCCG ACTTCGGACC GGACAGAGAT CATCGTGGAC
GTGACCGAGC GCGCCAATGC CTCGATCGCC AAGACCGATG CCGACATGGC CAGGATCGAG
GCGATGCTGG CCGAGGAACG GGACGCGCTA TTCTGGACCA CCTATGTCGG CCGCGGCGCG
CCGCGGTTCG TTCTCTCGAT GGATGTGCCC ACGCCCGGCC CCTATATGGG CCAGATCGTG
ATCCAGACCC CCGATCTGGC GGCGCGCGAC AGGCTCAAGG CGCGGCTGAT CGAATTCGCC
GGGCGCGAAC TGATCGGCAC CGACATCTAT GTCAAGAACC TTGAAATCGG GCCGCCGGTC
GGCAAGCCGG TGCAGTATCG CGTCTCGTCG CCCGACCTGG ACCAGGCGCG CGACGCGGCG
CGCGAGCTTG CCGCGGTGCT GGCGACCGAG CCGCGGCTGC GCGACATCGC GCTGGACTGG
AACGAGCCCG CGCGCGTGGT GCGGTTGCAG GTGAACCAGG ACCAGGCCCG CCGGCTGGGC
CTGACCAACG AGGATATTTC GGGGGCGCTG TCGGGAACCT TCAGCGGCCG CACGATCACC
CAGTTGCGCG ACGGCATCTT CCTGATCAAC GTCACCGCCC GCGGCTCGCA GGAGGATCGC
GAATCGCTGG CCTCGATCCA GAACCTGCAA CTGGCGACGC CGACCGGCAC GCCGATCCCG
CTCGCCTCGC TGGCCAAGCT GGAATACGAT ACCGAGCAAC CGCTGATCAT GCAGCGCGAC
GGGTTGCCGA CCGTCACCGT CAAGGCCGAT ATCGCCAGCA AGGACCAGCC CGCCACGCTG
GTCGAGGCGC TGGCCGACAA GGTTGCGCGC TTCCAGGCCG GATTGCCGCC AGGGGTCAAG
GTCGTGGTCG GCGGCACGGT CGAGACCTCG GCCGAAAGCC AGGAGCCCAT CGCCGCCGTG
GTGCCGATCA TGCTGCTGAT CATGGCCTCG CTGGTGATGG TGCAGATGCA GGGCTTCCGG
CTGTCCTTCA TCGTCTTTGC CGCCGCACCG CTGGGGCTGA TCGGCGTGGT CGCGGCACTC
TTGCCCTTCG GGGTGCCGAT GGGCTTCGTC GCCATCCTCG GCATCCTGGC GCTGATCGGC
ATCCTGATCC GCAACTCGGT CATCCTGGTG CACGAAATCC AGGAGCTGAT CGCCAAGGGC
CATGCGAAAT GGGACGCGGT CTTCGAGGCA TCCGACAGCC GCGCCCGCCC GATCCTGCTG
ACGGCGGCGG CGGCCAGCCT GGCACTGATC CCGATCTCGC GCCAGGTGTT CTGGGGGCCG
ATGGCCTTTG CCATGATGGG CGGCATCATC GCCGGCACGC TGGTGACGCT GATCTTCGTC
CCGGCGCTTT ACTGCGCGGT ATTCGGCGTC CGCCCGCCCA AGGGCGACCC GATGCCCAGC
GCCGAGGACC GCGCCCGCGC CGCCGCGCAG GAATAA
 
Protein sequence
MTNRGFNLSD WALHHRSLVW FLLIISMVAG TLSYLRLGRE EDPNFTIKIM VISASLPGAT 
IEDTLNQVTT RIETKLEELD ELKFTRSVTM PGQSVVYLEL DPTIRGPQVP EVWKRVRNMM
SDIRPEFPQE FQGFQFNDDF GDVFGNIYAF TSDGFTQREL RDRVEDIRKQ VQALPMAGKT
QLLGVRKEQI YLEFSSARLA ALGLNHNQVV QTLALQNAIS PSGIVQAGPE QVLVRVGGQF
DDAQSIAAVN LRVGDRFFNI GDVATVTRGY EDPPSALFRY NGKEAVGLQI GMREGGNILE
FGQHVDALMA EVARGLPIGI EMAKFADQPH VVDEAVGHFV QALAEAVAIV LLVSFVSLGL
RAGFVVTLTI PLVLAITFVI LDIYGITLQR ISLGALIIAL GLLVDDAMIA IETMISRLEV
GDSLERAASH AWSSIAFPML TGTLVTVAGF IPIGLNSSAA GEFTFSLFVV IAVSLIVSWI
VAVLFAPLLG VTMLPATMVH KSERPSWLRR RFHGLLLWGM HHKWLTIAVT LAVFAISVVG
MRFVEQQFFP TSDRTEIIVD VTERANASIA KTDADMARIE AMLAEERDAL FWTTYVGRGA
PRFVLSMDVP TPGPYMGQIV IQTPDLAARD RLKARLIEFA GRELIGTDIY VKNLEIGPPV
GKPVQYRVSS PDLDQARDAA RELAAVLATE PRLRDIALDW NEPARVVRLQ VNQDQARRLG
LTNEDISGAL SGTFSGRTIT QLRDGIFLIN VTARGSQEDR ESLASIQNLQ LATPTGTPIP
LASLAKLEYD TEQPLIMQRD GLPTVTVKAD IASKDQPATL VEALADKVAR FQAGLPPGVK
VVVGGTVETS AESQEPIAAV VPIMLLIMAS LVMVQMQGFR LSFIVFAAAP LGLIGVVAAL
LPFGVPMGFV AILGILALIG ILIRNSVILV HEIQELIAKG HAKWDAVFEA SDSRARPILL
TAAAASLALI PISRQVFWGP MAFAMMGGII AGTLVTLIFV PALYCAVFGV RPPKGDPMPS
AEDRARAAAQ E