Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2606 |
Symbol | |
ID | 4580705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2617911 |
End bp | 2618396 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639769935 |
Product | OstA family protein |
Protein accession | YP_916389 |
Protein GI | 119385333 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.664042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGGC CCCGACCGCT TTTGCCCGTG ATCCTGTCGC TCGTGCTGGC GGCGGGCGCG GCTCTGGGGC AGACCGCCGG CTTCGGCAAC GCGCAGGACA TCAAGCAGCC GGTCGAGGTC ACCGCCGATG CGCTGACGGT GGACCAGAAG ACGGGCCGGG CGACCTTTTC CGGCAATGTG CTGATCGGGC AGGGGGCGAT GCGGCTCTCG GCGGACAGCG TGACCGTGAC CTATGCCCAG GGCGACCAGC GCCGCATCAG CGCATTGCAT GCCGAGGGCA ACGTCACCCT GGCCAGCGGC GAGGACGCGG CCGAGGCGCA GGCGGCCGAC TACGATGTCG AGACCGGAAC CATCGTGCTG ACCGGCGACG TGCTTCTGAC CCAGGGCGGC AATCTGCTGG CGGGCGACAA GGTGACGGTG AACCTGGAAA GCGGCACCGC CAACGCCTCG GGCCGGGTGC GCAGCGTCCT GCAGCCGGAG AACTGA
|
Protein sequence | MIRPRPLLPV ILSLVLAAGA ALGQTAGFGN AQDIKQPVEV TADALTVDQK TGRATFSGNV LIGQGAMRLS ADSVTVTYAQ GDQRRISALH AEGNVTLASG EDAAEAQAAD YDVETGTIVL TGDVLLTQGG NLLAGDKVTV NLESGTANAS GRVRSVLQPE N
|
| |