Gene Pden_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2606 
Symbol 
ID4580705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2617911 
End bp2618396 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content70% 
IMG OID639769935 
ProductOstA family protein 
Protein accessionYP_916389 
Protein GI119385333 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.664042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGC CCCGACCGCT TTTGCCCGTG ATCCTGTCGC TCGTGCTGGC GGCGGGCGCG 
GCTCTGGGGC AGACCGCCGG CTTCGGCAAC GCGCAGGACA TCAAGCAGCC GGTCGAGGTC
ACCGCCGATG CGCTGACGGT GGACCAGAAG ACGGGCCGGG CGACCTTTTC CGGCAATGTG
CTGATCGGGC AGGGGGCGAT GCGGCTCTCG GCGGACAGCG TGACCGTGAC CTATGCCCAG
GGCGACCAGC GCCGCATCAG CGCATTGCAT GCCGAGGGCA ACGTCACCCT GGCCAGCGGC
GAGGACGCGG CCGAGGCGCA GGCGGCCGAC TACGATGTCG AGACCGGAAC CATCGTGCTG
ACCGGCGACG TGCTTCTGAC CCAGGGCGGC AATCTGCTGG CGGGCGACAA GGTGACGGTG
AACCTGGAAA GCGGCACCGC CAACGCCTCG GGCCGGGTGC GCAGCGTCCT GCAGCCGGAG
AACTGA
 
Protein sequence
MIRPRPLLPV ILSLVLAAGA ALGQTAGFGN AQDIKQPVEV TADALTVDQK TGRATFSGNV 
LIGQGAMRLS ADSVTVTYAQ GDQRRISALH AEGNVTLASG EDAAEAQAAD YDVETGTIVL
TGDVLLTQGG NLLAGDKVTV NLESGTANAS GRVRSVLQPE N