Gene Pden_2605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2605 
Symbol 
ID4580704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2617172 
End bp2617906 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID639769934 
ProductABC transporter related 
Protein accessionYP_916388 
Protein GI119385332 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.675994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA AACAGGGGCT GCGGGTTCGC GGCTTGCGCA AATCCTACCG CAACCGCCCG 
GTGATCCGCG ACGTGGCAAT GGATCTGGAG CGCGGCGAGG TGGTGGCGCT GCTGGGTCCG
AACGGCTCGG GCAAGACCAC CTGCTTCTAT TGCGTGGCCG GGCTGGTCGC ACCTGATTCG
GGCCAGGTGC TGATCGACGG GCGGGACGCG ACGCGCCTGC CGATGTATCG CCGCGCGCAA
ATGGGCATCG GCTATCTGCC GCAGGAGATG TCGATCTTTC GCGGGTTGAC GGTCGAGCAG
AACATCATGG CGGTGCTGGA ACTGGTCGAG CCGCATGTCC ACCAGCGGCG CGAGCGGCTG
GAAGAACTGC TGGGCGATTT CTCGATCGGT CATCTGCGGG GCGCCTCGGC CATGGCGCTG
TCGGGGGGCG AGCGGCGCCG GGTCGAGATC GCCCGCTGCC TTGCGGCCGA TCCGGCCTAT
CTGCTTCTGG ACGAACCATT CGCCGGCGTC GATCCCATCG CCGTAGGCGA GATCCGCGCC
CTTGTCCACG ACCTGAAAAG CCGCGGCATC GGCGTGCTGA TCACCGATCA CAACGTCCGC
GAAACGCTGG AAATCGTGGA TCGCGCCTAT ATCCTGCACG ACGGCCATGT GCTGAAATCC
GGCACCACCG CCGAGATCGT CGCCGATCCG CAGGTCCGTC GCGTCTACCT GGGCGAAACC
TTCCGCATGA ACTGA
 
Protein sequence
MSEKQGLRVR GLRKSYRNRP VIRDVAMDLE RGEVVALLGP NGSGKTTCFY CVAGLVAPDS 
GQVLIDGRDA TRLPMYRRAQ MGIGYLPQEM SIFRGLTVEQ NIMAVLELVE PHVHQRRERL
EELLGDFSIG HLRGASAMAL SGGERRRVEI ARCLAADPAY LLLDEPFAGV DPIAVGEIRA
LVHDLKSRGI GVLITDHNVR ETLEIVDRAY ILHDGHVLKS GTTAEIVADP QVRRVYLGET
FRMN