Gene Pden_2594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2594 
SymbolinfB 
ID4580693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2604645 
End bp2607191 
Gene Length2547 bp 
Protein Length848 aa 
Translation table11 
GC content68% 
IMG OID639769923 
Producttranslation initiation factor IF-2 
Protein accessionYP_916377 
Protein GI119385321 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.914394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CTGACGGAAA GAAACCCCTG GGTCTTGGTG GCGGCCGTTC GGGCCATGTG 
AAGCAAAGCT TCAGCCACGG ACGGACCCAT AACGTGGTCG TAGAGACCAA GCGCAAGCGC
GTGGTCGTGC CCGGCAAGAC GGGCGCGGCG GCTGGCGGCG GGCGCTCGGG CTCGCCCTCG
GCCGTGTCGG GCGACCCGTC TAAGCGACCC GCCGGTATCT CGGATGCCGA GATGGAGCGG
CGCATGGCCG CCTTGCGCGC CGCCAAGGCC CGCGAGGTCG AGGAGGCCGC GCAGCGCATT
GCCGACGAAA AGGCCCGCGA GGAAGAACGC GAACGCCGCC GGCTCGAGCT GGAGGCCAAG
GAGCGCGAGG AGCGCGAGCG CGAGGAAGCC CTGCGGCTGA AGGCCGAGGA AGACGAGCGC
CGCGCCCGCG AGGCCGAGTT GCGCGAAAAG AAGAAGGCCG AGATCGCCAA GCCCAAGACG
GAAGCCCGCC CGGCGACACC CGCCGACCGT GCCGCCGCCG AGGCCGCCGC CGTGCGCGCC
GAGACCAAGG GCGTCAGCGC CGCCGGCCCG CGCAAGACCG ACCGCGACCG CGACACCCGC
GGCGGCGGCG GCGACGACCG CGACAGCCGC AACAAGGGCC GCGACGACAG TCGCCGCACC
GGCAAGCTGT CGCTTTCGCA GGCGCTGGAC GGCGAAGGCG GGCGCCAGCG CAGCCTGGCC
GCGATGAAGC GCAAGCAGGA AAAGGCCCGG CAAAAGGCCA TGGGCGGCAA CCAGCGCGCC
GAAAAGCAGG TGCGCGACGT GCAGCTGCCC GAAACCATCG TGGTTTCGGA GCTGGCCAAC
CGCATGGCCG AGCGCACGCC GGATGTCATC AAGTCGCTGA TGCGCATGGG CATGATGGTC
ACCGCGAACC AGTCGATCGA CGCCGACACC GCCGAACTGG TGATCGACGA GTTCGGCCAT
CACGCCGTCC GCGTCTCGGA TGCCGATGTC GAGCAGGTCA TCGACCAGGT CGAGGACAAG
CCCGAGGATC TGCAGCCGCG CGCGCCGATC ATCACCATCA TGGGCCATGT CGACCACGGC
AAGACCTCGC TGCTGGACGC GATCCGTCAC GCCAATGTCG TGGCGGGCGA AGCCGGCGGC
ATCACCCAGC ATATCGGCGC CTATCAGGTG AAAGCCTCGA ACGGGGCGGT GCTGACCTTC
CTCGACACGC CCGGCCACGC GGCCTTCACC TCGATGCGGG CCCGTGGCGC GCAGGTGACG
GATATCGTCG TGCTGGTGGT CGCCGCCGAT GACGCCGTGA TGCCGCAGAC GGTCGAGGCG
ATCAACCACG CCAAGGCCGC CAAGGTGCCG ATGATCGTGG CGATCAACAA GATCGACAAG
CCCGCCGCCA ACCCGCAGAA GGTCCGCACC GATCTGCTGC TGCACGAGGT CGTCGTCGAG
GCGATGTCGG GCGAGGTGCA GGATGTCGAG GTCTCGGCCA AGACCGGCCA GGGCCTGGAC
ACACTCCTGG AAGCCATTGC GCTGCAGGCC GAGATCCTCG AACTGAAGGC CAATCCCGAC
CGCCCGGCCC AGGGCGCGGT GATCGAGGCG CAGCTGGACG TCGGCCGGGG TCCGGTCGCC
ACGGTCCTGG TCCAGAACGG CACGCTGAAG CGCGGCGACA TCTTCGTCGT CGGCGAACAG
TGGGGCAAGG TTCGCGCGCT GATCAACGAC AAGGGCGAGC GCGTGGACGA GGCCGGCCCC
TCGGTCCCGG TCGAGGTGCT GGGCCTGAAC GGCACGCCCG AGGCGGGCGA CGTGCTGAAC
GTCGTCTCGA CCGAGGCGCA GGCCCGCGAG ATCGCGGATT ACCGCATCCA GGCCGCCAAG
GACAAACGCG CCGCCGCCGG TGCCGCGATC ACGCTGGACC AGATGCTGGC CAAGGCCAAG
GCCGACGAGA ACGTCGCCGA ACTGCCGGTG GTCATCAAGG CCGACGTGCA GGGCTCGGCC
GAGGCCATCG TCCAGGCGCT GGAAAAGATC GGCAACGACG AGGTGCGCGT CCGCGTGCTG
CATTACGGCG TCGGCGCGAT CACCGAATCG GATATCGGCC TGGCCGAGGC CAGCCAGGCG
CCGGTGATCG GCTTCAACGT CCGGGCAAAT GCCCCGGCGC GGAACGCCGC CAACCAGAAA
GGGGTCGAGA TCCGCTATTA CTCGATCATC TACGACCTGG TTGACGACAT CAAGGCGGCG
GCCTCGGGCC TGCTTTCCGC CGAAGTGCGC GAGAACTTCA TCGGCTATGC CGAGATCAAG
GAAGTCTTCC GCGTTTCGGG CGTGGGCAAT GTCGCCGGCT GCCTCGTCAC CGAGGGCGTG
GCGCGTCGCT CGGCCGGCGT GCGCCTGCTG CGCGACAACG TGGTGATCCA CGAGGGCACG
CTGAAGACGC TCAAGCGCTT CAAGGACGAG GTCAAGGAAG TGCAGTCCGG CCAGGAATGC
GGCATGGCCT TCGAAAACTA CGACGACATC CGCAAGGGCG ATGTCATCGA GATCTTCGAG
CGCGAGGAAG TGCAGCGCCA GCTGTGA
 
Protein sequence
MSDTDGKKPL GLGGGRSGHV KQSFSHGRTH NVVVETKRKR VVVPGKTGAA AGGGRSGSPS 
AVSGDPSKRP AGISDAEMER RMAALRAAKA REVEEAAQRI ADEKAREEER ERRRLELEAK
EREEREREEA LRLKAEEDER RAREAELREK KKAEIAKPKT EARPATPADR AAAEAAAVRA
ETKGVSAAGP RKTDRDRDTR GGGGDDRDSR NKGRDDSRRT GKLSLSQALD GEGGRQRSLA
AMKRKQEKAR QKAMGGNQRA EKQVRDVQLP ETIVVSELAN RMAERTPDVI KSLMRMGMMV
TANQSIDADT AELVIDEFGH HAVRVSDADV EQVIDQVEDK PEDLQPRAPI ITIMGHVDHG
KTSLLDAIRH ANVVAGEAGG ITQHIGAYQV KASNGAVLTF LDTPGHAAFT SMRARGAQVT
DIVVLVVAAD DAVMPQTVEA INHAKAAKVP MIVAINKIDK PAANPQKVRT DLLLHEVVVE
AMSGEVQDVE VSAKTGQGLD TLLEAIALQA EILELKANPD RPAQGAVIEA QLDVGRGPVA
TVLVQNGTLK RGDIFVVGEQ WGKVRALIND KGERVDEAGP SVPVEVLGLN GTPEAGDVLN
VVSTEAQARE IADYRIQAAK DKRAAAGAAI TLDQMLAKAK ADENVAELPV VIKADVQGSA
EAIVQALEKI GNDEVRVRVL HYGVGAITES DIGLAEASQA PVIGFNVRAN APARNAANQK
GVEIRYYSII YDLVDDIKAA ASGLLSAEVR ENFIGYAEIK EVFRVSGVGN VAGCLVTEGV
ARRSAGVRLL RDNVVIHEGT LKTLKRFKDE VKEVQSGQEC GMAFENYDDI RKGDVIEIFE
REEVQRQL