Gene Pden_2592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2592 
SymbolnusA 
ID4580691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2602322 
End bp2604001 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content66% 
IMG OID639769921 
Producttranscription elongation factor NusA 
Protein accessionYP_916375 
Protein GI119385319 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.808645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.776822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCA CCTCTGCCAA CCAGCTTGAA CTGCTGCAAA CCGCCGAGGC CGTTGCACGG 
GAAAAGATGA TCGACCCCGA TCTGGTGATC GAGGCGATGG AGGACAGCCT GGCCCGCGCG
GCGAAGTCGC GCTATGGCAG CGAGATGGAC ATCCGCGTCC ATATCGACCG CAAGACCGGC
AACGCCACCT TCACCCGCGC CCGCACCGTG GTCGAGGACG AAGCGGTCGA GAACTATCAG
GCGCAATTCA CCGCCGACCA GGCTGCGCCC TATTTCGAGC CCTCGAAGGA CGGCCGCGCC
CATTGGCTGC GCGACGGCGC GCAGCTGGCC GATTTCTCGG GCAGGCCGCA GCCCGGCGAC
GTGTTCGAGG AGCAGGTGCC CCCGGTCGAT CTGGGCCGCA TCGCCGCGCA ATCGGCCAAG
CAGGTGATCC TGCAAAGGGT CCGCGAGGCC GAGCGCGACC GCCAATACGA GGAATTCAAG
GACCGCGTCG GCAGCATCAT CAACGGCGTC GTCAAGCGCG AGGAATACGG CAACATCATC
GTTGACGTGG GCCGCGGCGA GGCGATCCTG CGCCGCAACG AAAAGATCGG CCGCGAAAGC
TATCGCCCGA ACGACCGCAT CCGCGCCTAT GTCAAGGACG TGCGCCGCGA GGCGCGCGGC
CCGCAGATCT TCCTGTCGCG CACCGATCCG CAGTTCATGG CCGAGCTGTT CAAGATGGAA
GTGCCGGAAA TCTATGACGG CGTGATCGAG ATCAAGGCCG TGGCCCGCGA TCCCGGCTCG
CGCGCCAAGA TCGCCGTGAT CTCCTACGAC AACTCGATCG ACCCGGTCGG CGCCTGCGTC
GGCATGCGCG GCTCGCGCGT GCAGGCCGTG GTCGGCGAGC TGCAGGGCGA AAAGATCGAC
ATCATCCCGT GGTCCGACGA TCAGGCGACC TTCCTGGTGA ATGCGCTGCA ACCGGCCGAG
GTGGCGAAGG TCGTCTTCGA CGAGGACGCG ACCCGCATCG AGGTGGTGGT GCCGGACGAG
CAACTGTCGC TGGCCATCGG CCGTCGCGGC CAGAACGTGC GGCTGGCAAG CCAGCTGACG
GGCCTCGACA TCGATATCCT CACCGAAGAA GAGGAATCGA AGCGCCGGCA GGCCGAGTTC
AACGCCCGCA CCAAGCTGTT CATGGACGCG CTGGACCTGG ACGAGTTCTT TGCCCAGCTT
CTGGTCGCCG AGGGCTTCAC CAACCTCGAA GAGGTGGCCT ATGTCGACCT GGACGAGCTG
CTCTCGATCG AGGGCGTGGA CGAAGGCACC GCCGAGGAAC TGCAGACCCG CGCCCGCGAG
CACCTGGAGG CCGCGAACAA GGCCGCGCTG GAAAACGCCC GCGCCCTTGG CGTCGAGGAC
AGCCTGATCG AGTTCGAGGG GCTGACCCCG CAGATGGTCG AGGCGCTGGC CAAGGACGGC
GTCAAGACGC TGGAGGACTT CGCCACCTGC GCCGATTGGG AACTGGCCGG CGGCTGGACC
ACGCAGAACG GCCAGCGCGT CAAGGACGAC GGCATCCTGG AGCCCTTCGA CGTCTCTCTG
GAAGAGGCGC AGACCATGGT GATGACCGCC CGCGTGATGC TGGGCTGGGT CGACCCGACC
GAACTCGAAT CGGCCGACGA AGCCGAGGCC GAGGGCGACG AACAGGAGGC CGGGGTGTAA
 
Protein sequence
MAITSANQLE LLQTAEAVAR EKMIDPDLVI EAMEDSLARA AKSRYGSEMD IRVHIDRKTG 
NATFTRARTV VEDEAVENYQ AQFTADQAAP YFEPSKDGRA HWLRDGAQLA DFSGRPQPGD
VFEEQVPPVD LGRIAAQSAK QVILQRVREA ERDRQYEEFK DRVGSIINGV VKREEYGNII
VDVGRGEAIL RRNEKIGRES YRPNDRIRAY VKDVRREARG PQIFLSRTDP QFMAELFKME
VPEIYDGVIE IKAVARDPGS RAKIAVISYD NSIDPVGACV GMRGSRVQAV VGELQGEKID
IIPWSDDQAT FLVNALQPAE VAKVVFDEDA TRIEVVVPDE QLSLAIGRRG QNVRLASQLT
GLDIDILTEE EESKRRQAEF NARTKLFMDA LDLDEFFAQL LVAEGFTNLE EVAYVDLDEL
LSIEGVDEGT AEELQTRARE HLEAANKAAL ENARALGVED SLIEFEGLTP QMVEALAKDG
VKTLEDFATC ADWELAGGWT TQNGQRVKDD GILEPFDVSL EEAQTMVMTA RVMLGWVDPT
ELESADEAEA EGDEQEAGV