Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2592 |
Symbol | nusA |
ID | 4580691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2602322 |
End bp | 2604001 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639769921 |
Product | transcription elongation factor NusA |
Protein accession | YP_916375 |
Protein GI | 119385319 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.808645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.776822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCA CCTCTGCCAA CCAGCTTGAA CTGCTGCAAA CCGCCGAGGC CGTTGCACGG GAAAAGATGA TCGACCCCGA TCTGGTGATC GAGGCGATGG AGGACAGCCT GGCCCGCGCG GCGAAGTCGC GCTATGGCAG CGAGATGGAC ATCCGCGTCC ATATCGACCG CAAGACCGGC AACGCCACCT TCACCCGCGC CCGCACCGTG GTCGAGGACG AAGCGGTCGA GAACTATCAG GCGCAATTCA CCGCCGACCA GGCTGCGCCC TATTTCGAGC CCTCGAAGGA CGGCCGCGCC CATTGGCTGC GCGACGGCGC GCAGCTGGCC GATTTCTCGG GCAGGCCGCA GCCCGGCGAC GTGTTCGAGG AGCAGGTGCC CCCGGTCGAT CTGGGCCGCA TCGCCGCGCA ATCGGCCAAG CAGGTGATCC TGCAAAGGGT CCGCGAGGCC GAGCGCGACC GCCAATACGA GGAATTCAAG GACCGCGTCG GCAGCATCAT CAACGGCGTC GTCAAGCGCG AGGAATACGG CAACATCATC GTTGACGTGG GCCGCGGCGA GGCGATCCTG CGCCGCAACG AAAAGATCGG CCGCGAAAGC TATCGCCCGA ACGACCGCAT CCGCGCCTAT GTCAAGGACG TGCGCCGCGA GGCGCGCGGC CCGCAGATCT TCCTGTCGCG CACCGATCCG CAGTTCATGG CCGAGCTGTT CAAGATGGAA GTGCCGGAAA TCTATGACGG CGTGATCGAG ATCAAGGCCG TGGCCCGCGA TCCCGGCTCG CGCGCCAAGA TCGCCGTGAT CTCCTACGAC AACTCGATCG ACCCGGTCGG CGCCTGCGTC GGCATGCGCG GCTCGCGCGT GCAGGCCGTG GTCGGCGAGC TGCAGGGCGA AAAGATCGAC ATCATCCCGT GGTCCGACGA TCAGGCGACC TTCCTGGTGA ATGCGCTGCA ACCGGCCGAG GTGGCGAAGG TCGTCTTCGA CGAGGACGCG ACCCGCATCG AGGTGGTGGT GCCGGACGAG CAACTGTCGC TGGCCATCGG CCGTCGCGGC CAGAACGTGC GGCTGGCAAG CCAGCTGACG GGCCTCGACA TCGATATCCT CACCGAAGAA GAGGAATCGA AGCGCCGGCA GGCCGAGTTC AACGCCCGCA CCAAGCTGTT CATGGACGCG CTGGACCTGG ACGAGTTCTT TGCCCAGCTT CTGGTCGCCG AGGGCTTCAC CAACCTCGAA GAGGTGGCCT ATGTCGACCT GGACGAGCTG CTCTCGATCG AGGGCGTGGA CGAAGGCACC GCCGAGGAAC TGCAGACCCG CGCCCGCGAG CACCTGGAGG CCGCGAACAA GGCCGCGCTG GAAAACGCCC GCGCCCTTGG CGTCGAGGAC AGCCTGATCG AGTTCGAGGG GCTGACCCCG CAGATGGTCG AGGCGCTGGC CAAGGACGGC GTCAAGACGC TGGAGGACTT CGCCACCTGC GCCGATTGGG AACTGGCCGG CGGCTGGACC ACGCAGAACG GCCAGCGCGT CAAGGACGAC GGCATCCTGG AGCCCTTCGA CGTCTCTCTG GAAGAGGCGC AGACCATGGT GATGACCGCC CGCGTGATGC TGGGCTGGGT CGACCCGACC GAACTCGAAT CGGCCGACGA AGCCGAGGCC GAGGGCGACG AACAGGAGGC CGGGGTGTAA
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Protein sequence | MAITSANQLE LLQTAEAVAR EKMIDPDLVI EAMEDSLARA AKSRYGSEMD IRVHIDRKTG NATFTRARTV VEDEAVENYQ AQFTADQAAP YFEPSKDGRA HWLRDGAQLA DFSGRPQPGD VFEEQVPPVD LGRIAAQSAK QVILQRVREA ERDRQYEEFK DRVGSIINGV VKREEYGNII VDVGRGEAIL RRNEKIGRES YRPNDRIRAY VKDVRREARG PQIFLSRTDP QFMAELFKME VPEIYDGVIE IKAVARDPGS RAKIAVISYD NSIDPVGACV GMRGSRVQAV VGELQGEKID IIPWSDDQAT FLVNALQPAE VAKVVFDEDA TRIEVVVPDE QLSLAIGRRG QNVRLASQLT GLDIDILTEE EESKRRQAEF NARTKLFMDA LDLDEFFAQL LVAEGFTNLE EVAYVDLDEL LSIEGVDEGT AEELQTRARE HLEAANKAAL ENARALGVED SLIEFEGLTP QMVEALAKDG VKTLEDFATC ADWELAGGWT TQNGQRVKDD GILEPFDVSL EEAQTMVMTA RVMLGWVDPT ELESADEAEA EGDEQEAGV
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