Gene Pden_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2590 
Symbol 
ID4580689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2600516 
End bp2601502 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content70% 
IMG OID639769919 
Productproline iminopeptidase 
Protein accessionYP_916373 
Protein GI119385317 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01249] proline iminopeptidase, Neisseria-type subfamily 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.704595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGAT TGGCAGGGCA AATCGGCGGC ACGCCGTCGC ATGGCAGGCT GCACCCGATG 
GTCGAGCCCT TCGACCGCCG GGTGATCGAT GTCGGCGACG GCCACCAGTT GCATGTCGAG
CAAAGCGGCA ATCCCGACGG CGTGCCGGTG ATCGTGCTGC ATGGCGGACC GGGCGGCGGA
TGCAGCCCCT ATATGCGGCG ATTCTTCGAT CCGGCGCATT ACCGGGCGGT GCTGTTCGAC
CAGCGCGGCT GCGGCCGCTC GCAGCCCCAT GCCGCCGTCA TCGCCAACAC CACCCAGCAC
CTGATCGCCG ATATCGAGGT GATCCGCCGC ACCTTGGGCA TCGAGCGGGC GATCCTGTTC
GGCGGCAGCT GGGGCGCGAC CCTGGCCCTG GCCTATGCCC AGGCCCATCC CGAGCCGGTC
GAAGCGCTGG TGCTGCGCGG GGTCTTTCTG GGCCGGCGGG CCGAGCTGGA CTGGTTCTAT
GGCGGGGGCG TCGCGCGCTT CTTTCCTGAT CGCTGGGCCG AGTTCCAGGC CCCGATTCCC
GAGGCCGAGC GCGGCGACAT GATCGCCGCC TATCACCGGC GGCTGTTCAG CGGCGACCGC
GGGCAGGAGA CGCGCTTCGC CCTGCCCTGG CTGGTCTGGG AAAACGCGCT GGCGGGGCTG
GAGATCAACG GGCCGGGCCA TGCACCCCCC GACTATGCCC GCACCTTCGC CCGGCTGGAG
AATCACTATT TCGCCCATGG CTGCTTCCTG GCCGAGGGCC AGCTTTTGCG CGACCGCCAC
CGCATCCAGC ATATCCCGGC CGTGATCGTG CAGGGCCGCT ATGACATGGT CTGCCCGCCC
GCCACCGCCT GGGAGCTGGC CGAGGGCTGG GACCGGGCCG AATTGCGGCT GGTCCCAGCC
TCGGGCCATG CCCTGAGCGA GCCGCGAATC GCCGCTGAGC TGGTGCGCGT CATGGACGGC
TTTCGGGATG CGGCGGGGCG GGGCTGA
 
Protein sequence
MDRLAGQIGG TPSHGRLHPM VEPFDRRVID VGDGHQLHVE QSGNPDGVPV IVLHGGPGGG 
CSPYMRRFFD PAHYRAVLFD QRGCGRSQPH AAVIANTTQH LIADIEVIRR TLGIERAILF
GGSWGATLAL AYAQAHPEPV EALVLRGVFL GRRAELDWFY GGGVARFFPD RWAEFQAPIP
EAERGDMIAA YHRRLFSGDR GQETRFALPW LVWENALAGL EINGPGHAPP DYARTFARLE
NHYFAHGCFL AEGQLLRDRH RIQHIPAVIV QGRYDMVCPP ATAWELAEGW DRAELRLVPA
SGHALSEPRI AAELVRVMDG FRDAAGRG