Gene Pden_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2588 
Symbol 
ID4580687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2599097 
End bp2599606 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID639769917 
ProductMarR family transcriptional regulator 
Protein accessionYP_916371 
Protein GI119385315 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.668736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACA AGACGCACGA CAACCCGCAA GGGCATGCCG AAGCCTCGGC CGATGCCTTG 
GCCGCAAGCC TGTTTTCCGA GGTGTTCATC GCCGACCAGC TGGCGCGCGA CCTGATCGGC
AAGGCACTGC CCAAGGGCAT GCAGATCTCG CATTTCTCGG TCCTGAACCT GCTGGCGCAC
CTGAATGTCG AGCGCACGCC GGCCGAGCTG GCCGAGGCGT TTCACGTCAC ACGCGGCGCC
ATGACCAACA CGCTGTCGCG GCTGGAATGG GCCGGGCATA TCCATATCCG CCCGGATTGG
GACGACGCGC GGCGCAAGTT CATCGCCATC AGCCCGGCCG GGCGGGCGGC GCGCGACGCG
GCGCTGGCCG CCTTCATGCC GCGAATCGCC GACGTGGTGC GGGATGTCGG CGCCGACCGG
GTGCGCGCGG CGCTGCCGGT TTTGCGCATG CTGCGCAAGC AACTGGAAGA GACGTTGCGT
CACGAAAACC GCGGCTCGGG CGGGCGCTGA
 
Protein sequence
MIHKTHDNPQ GHAEASADAL AASLFSEVFI ADQLARDLIG KALPKGMQIS HFSVLNLLAH 
LNVERTPAEL AEAFHVTRGA MTNTLSRLEW AGHIHIRPDW DDARRKFIAI SPAGRAARDA
ALAAFMPRIA DVVRDVGADR VRAALPVLRM LRKQLEETLR HENRGSGGR