| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2578 |
|---|
| Symbol | |
|---|
| ID | 4579883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2591724 |
|---|
| End bp | 2592239 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639769907 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_916361 |
|---|
| Protein GI | 119385305 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.633059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.401653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGGG CAATTCGCGC ATTTCTCGCG GTTGTCGCAG TTGCCGTCGT GGCAAGCTGC
GGCGGTGGCG ACAGCCTCCA ACCTAGCAAG ACCTATCAGG GGCCGCCCAT CACGCAGATC
GTGGTGAAGA AGGCCGACCG CAAGATGTAT CTGGTCAGCG GCAAGGAAGT CGTCAAAAGC
TACAAGGTCA ACCTCGGCAA CCAGCCGTTC GGGCCAAAGC AGTTCGAAGG CGACGGCCGC
ACGCCCGAGG GCATGTATTT CATCGACCGC TTCAACCCGC GCAGCCGCTA TCACCTGTCG
GTCGGCATCT CCTACCCCTC GGCGCAGGAC GTGGCCAAGG CGGCAGCCAT GGGACTGCGG
CCGGGCGGCG ATATCTTCAT CCACGGCCTC GGTCCCGAGG GGCGGGCACT GAACCGCGCG
GACTGGACCG CCGGCTGCAT CGCCGTGACC GATGAGGAGA TCGAAGAGAT TTTCACCATG
CTACGGCCGG GCGTGCCGAT CTTCATCTAC CCCTAA
|
|---|
| Protein sequence | MIRAIRAFLA VVAVAVVASC GGGDSLQPSK TYQGPPITQI VVKKADRKMY LVSGKEVVKS
YKVNLGNQPF GPKQFEGDGR TPEGMYFIDR FNPRSRYHLS VGISYPSAQD VAKAAAMGLR
PGGDIFIHGL GPEGRALNRA DWTAGCIAVT DEEIEEIFTM LRPGVPIFIY P
|
|---|
| |