| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2575 |
|---|
| Symbol | |
|---|
| ID | 4579880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2587413 |
|---|
| End bp | 2588579 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639769904 |
|---|
| Product | polynucleotide adenylyltransferase region |
|---|
| Protein accession | YP_916358 |
|---|
| Protein GI | 119385302 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.647835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTC TGACCGCGCC CTTCCTTGAC GATCCGGCAT TGAAGCAGGT TCTGGCCGCG
CTTGCGGCCG GGGGCGCGCA GGCGCTGATC GTCGGCGGCG CGGTCCGAAA CGCGCTTCTG
GGCGAACCGG TGGCGGATGT GGACATCTCG ACCTCGGCCC GGCCCGAGGA CACCGTGCGG
CTGGCCGAGG CCGCCGGGCT GCGCTCCGTG CCCACCGGCA TCGAGCACGG CACCGTCACC
GTCATCGCCG ACGGCCGCGG CTTCGAGGTC ACCAGCTTTC GCCGCGATGT CGAGACCTTC
GGCCGCCGTG CCGTCGTCGC CTATTCCGAC CGGATCGAGG ACGACGCCCA TCGCCGCGAC
TTCACCATGA ACGCGCTTTA CGCCACCGCC TCGGGCGAGG TTCTGGACCC GGTCGGCGGC
CTGCCGGACC TGGCCGCGCG GCGGCTGCGC TTCGTCGGCA ATCCGCACGC CCGCATCGCC
GAGGACTACC TGCGCATCCT GCGCTTCTTC CGCCTGCTCG CCTGGTATGG GCGCGAGGCC
GAGTTGCAGG CGCTTGCCGC CTGCCGCGAG CTGCGCGAGG GGTTGACCGG CATCTCCAGG
GAACGCATCG GGCACGAGAT CCGCAAGCTG CTGGACGCCC CGGACCCGTC CCGCGCCGTG
GCGCTGATGG CCGAGGCGGG CGTGCTGCCG CTGGTCCTGC CCGGTGCGGA TGCCGGCGAC
CTGCCCGATC TGGTCGAGGT CGAGCGGGAA TACGGCACCG GCGCCCTGCC CTGCTGGCCG
CGCCGGCTGG CCCTGCTGGC ACCGCAGGAT GCCGAGGGCG CCCTGCGCCT GTCGCGGGAC
GAGGCCCGCG CGCAGGACCA CATTGCCGCC GCGCTGGCCC TGCCCGCGCC CGCCGCCGCC
TATCGCTTCG GCCGCGCCAG CGCCGCGCAA GCGGTGCTGA TCCGTGCCGC CCGCGGCGAA
AGGCCGGCCT TCGGCTGGTG CCATGACCTG GCCCGCGGCG CCGCGGCGCA GTTCCCGCTG
ACCGCCCGCG ACCTGATGCC CGAACTGTCC GGCCCCGCCC TGGGCGAGGC GCTGCGCCGG
GCCGAGGCCG CCTTTGTCGA AAGCGATTTC ACCCTGCCGC GCGACGCGCT GCTGCGGATC
GCCCTGCAAC ACGAGGCCCG CGCCTGA
|
|---|
| Protein sequence | MTRLTAPFLD DPALKQVLAA LAAGGAQALI VGGAVRNALL GEPVADVDIS TSARPEDTVR
LAEAAGLRSV PTGIEHGTVT VIADGRGFEV TSFRRDVETF GRRAVVAYSD RIEDDAHRRD
FTMNALYATA SGEVLDPVGG LPDLAARRLR FVGNPHARIA EDYLRILRFF RLLAWYGREA
ELQALAACRE LREGLTGISR ERIGHEIRKL LDAPDPSRAV ALMAEAGVLP LVLPGADAGD
LPDLVEVERE YGTGALPCWP RRLALLAPQD AEGALRLSRD EARAQDHIAA ALALPAPAAA
YRFGRASAAQ AVLIRAARGE RPAFGWCHDL ARGAAAQFPL TARDLMPELS GPALGEALRR
AEAAFVESDF TLPRDALLRI ALQHEARA
|
|---|
| |