Gene Pden_2574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2574 
Symbol 
ID4579879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2586829 
End bp2587416 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content70% 
IMG OID639769903 
ProductNUDIX hydrolase 
Protein accessionYP_916357 
Protein GI119385301 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.536286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.595154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGATGG CGATCCGCGA GACATTGATG CGGGCCCTGT CGGGAACGAC GGGGCCTTCG 
TCCGATTTCG ACTTCGGAGG CACGCCGCCG GGCGAGGCGG TCCTGCGCCC TGCCGGCGTT
CTTGCCGCCT TCGACGCAGT GGACGGCCGG CTGATCCTGA CCAAGCGCGC CTCCAGCCTG
CGCCACCATC CCGGCCAGAT CGCCCTGCCC GGGGGCAAGG TCGATCCCGG CGATGCCGAC
GAAACCGCCG CCGCCCTGCG CGAGGCACAT GAGGAGGTCG GCCTCGACCC CGCCCGCGTC
GAGGTGCTGG GCACCATGCC GCCGCATCGC ACCATCACCG GCTTTGCCAT GACCCCGGTG
CTGGCGCTGG TCCACGGCCC CTTCACCCCC ATCCCCGAGA TGGGCGAGGT CGAGGAGGTC
TTTACCGTCC CCTTCGCCCA CGTCGCCGAT CCGGCGAACT ATCATATCGA GGGCCGGATC
TGGCGCGGGG CGCGGCGGGA CTATTACGTC GCCCCCTGGG GACCCTATTA TATCTGGGGC
GCCACCGCCC GCGTGCTGCA TTCCCTTGCG ACAAGGCTTT CCGCATGA
 
Protein sequence
MTMAIRETLM RALSGTTGPS SDFDFGGTPP GEAVLRPAGV LAAFDAVDGR LILTKRASSL 
RHHPGQIALP GGKVDPGDAD ETAAALREAH EEVGLDPARV EVLGTMPPHR TITGFAMTPV
LALVHGPFTP IPEMGEVEEV FTVPFAHVAD PANYHIEGRI WRGARRDYYV APWGPYYIWG
ATARVLHSLA TRLSA