| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2566 |
|---|
| Symbol | |
|---|
| ID | 4579871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2578835 |
|---|
| End bp | 2580241 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639769895 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_916349 |
|---|
| Protein GI | 119385293 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3391] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0965859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.110027 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATC CATCGCGCCC CTCATTTCGC GCCCTGCTTG GCGTGTCGGC GCTGGCGCTT
GCGGTGATTT CGGCCCCGGC GCTGGCCGAG ACCGTCTTCA CCAAGCCGCT GGTCGATTTC
CCGGGCCGCG TCAGCGCCGG CGGCGTCGAG CGCGCCCCGG TCCACAAGGG CGGCAAGGCG
GTGATCGAGG GCCAGGACCT GATCCCCGGC CAGACCGTCA CCCTGATGCG CGGCACCACC
ACGCTGAACG CCGAGCCGAT CACCGTCGAT GCCGAGGGCA AGTTCAGCTT TGCGCTGGAC
GTCGATGCCG AGGCCGAGAC CGGCTTGCAG CCCATCGCCG TCATCACCGA GAACCCGGCC
TCGGCCGAGG TGGTCCAGCT GAAGATCTCG CCCGAGGTGG CCATCTCGGG GGCCGATAAA
TTCGCCATCG CCAGCGAGCC GGTGGTGCGC GGGCTTTATC AGGTGAAGTT CAGCGAGGCC
GCGAATGCCG CCTTCGTGAC CAGCGCCGTC GGCCGCCCGC CGGTCAAGGA AGCGAAGCTG
GTCAAGATCA ACCCCGAGAC GCTGAAGATC GAGGCCGAGG CCGTCCCGGG CGCCGCGCCC
GCCCGTCCCG ACGGCAGCGA CGGCGGGCTG TTCGCCGTCT ACGGCGTCGA TGTCGACGAG
GCGAACGGCA ATGTCTGGGT GACCAACACC CGCCAGGACA CGGCCGCGGT CTACAAGCAA
TCGGACCTGT CGCTGGTCAA GCAGTTCGAG CCGGGCGCCG TGCCCCATGC CCGCGACGTC
GTGGTCGACG AGGCCAATGG CCGCGCCTAT GCCAGCGCCA CCGGCACGCC CGAGATCAAG
GTCTTCGACA CCGGGACGCT GGAGCCGCTG GAGCCGATCA CCATCCAGTC GCAGATCCGG
GGCGAAGAGT TCTCGACCAT GGCGCTGGAT ATCGACGAGG CGGGCGGCAA GCTGGTCACC
GTCAGCATTT CCACACCAGA AGCCGCGGTG GTCGATCTGG CCTCGGGCGA GGTCAAGGTG
ATCGCGCTGC CGGGCGCCAA GGTCGCCTCG GGCGTGGCCT ACGACCCGCA GGAGGGGCTG
ATCTTCGTCG CCTCGCAGGC CACCGACAAC CTGCTGATCG TCAAGGCCGA GACCGGCGAG
GTCCTGCATG ACGTGGCCGT CGGCGCCGGC CCGCTGAACG TCGCCTTCGA GCCGGTGGGC
CGCCTGGCCT ATGTCGCCAA TCGCGGCGCC GGCACCATCG CCGTGGTCAG CCCCGAGGGC
GAGGTCGTCG CCAACCTCGA CGCCGGCAGC TTCCCCAACC AGTTGCGCGC CGACGGCAAG
GGCAACGTCT GGGCGGTCAA CAAGTCGCGG GGCGAGGACG ACGAGGCGGG CGACCGCATC
TGGCGCATCA CCCCCGCCAC GGAGTAA
|
|---|
| Protein sequence | MAHPSRPSFR ALLGVSALAL AVISAPALAE TVFTKPLVDF PGRVSAGGVE RAPVHKGGKA
VIEGQDLIPG QTVTLMRGTT TLNAEPITVD AEGKFSFALD VDAEAETGLQ PIAVITENPA
SAEVVQLKIS PEVAISGADK FAIASEPVVR GLYQVKFSEA ANAAFVTSAV GRPPVKEAKL
VKINPETLKI EAEAVPGAAP ARPDGSDGGL FAVYGVDVDE ANGNVWVTNT RQDTAAVYKQ
SDLSLVKQFE PGAVPHARDV VVDEANGRAY ASATGTPEIK VFDTGTLEPL EPITIQSQIR
GEEFSTMALD IDEAGGKLVT VSISTPEAAV VDLASGEVKV IALPGAKVAS GVAYDPQEGL
IFVASQATDN LLIVKAETGE VLHDVAVGAG PLNVAFEPVG RLAYVANRGA GTIAVVSPEG
EVVANLDAGS FPNQLRADGK GNVWAVNKSR GEDDEAGDRI WRITPATE
|
|---|
| |