Gene Pden_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2538 
Symbol 
ID4579843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand+ 
Start bp2552062 
End bp2553234 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content73% 
IMG OID639769867 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_916321 
Protein GI119385265 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.83484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC CCTGGCTTTC CATCATCGGT ATTCAGGAGG ATGGCCTTGC CGGCCTGCCG 
CCTGCAAGCC GCGATGCGCT GGATCGGGCG GAAATCGTCT TCGGCGCCCC CCGGCATCTG 
GAACTGGCGG GGATCGGCGG GCAGCGGGGC CGGGCATGGC CGGTGCCTTT CGGTCTTGAT 
CCGCTGCTGG CCTTGCGCGG GGAAAGCGTG GCGGCGCTGG TTTCGGGCGA TCCGTTCTGG 
CATGGCGCCG GCGGCAGCAT CGCCGCCGTG CTGCAAACGG GCGAATGGCG GGCCTTTCCC 
GCGCCCGGCA CCTTTTCGCT GGCCGCCGCA AGGCTGGGCT GGCGGCTGGA GGAGACCGCC 
TGCCTCGGCC TGCATGCCGC GCCCTTTGCC CGGCTGCGCC CGGTGATGGC GCGGGGGGCG 
CGGGCGATCT GCCTGCTGCG CGACGGCACC GCCCCCGCCC AGCTTGCCGA ATGGCTGGTG 
GCGCAGGGGC TGGGCCCGAC GCGCATGGTG GTGATGGAGG CGCTTGGCGG CCCGCGCGAA 
CGCATCCGCG AGGCACGGGC GCAGGGTTTC GCGCTGGACT GCATCGCGCC GGTCGCGGTG 
GCGCTGGACG GGGCGGATCT GCCATCGGGC GCCGGCCTGC CGCGCGGCTT CGGCCTGCCC 
GACGACAGCT TCGCCCATGA CGGCCAGATC ACCCGTCGCG CCATCCGGGC GGTGACGCTG 
GCGGCACTTG GCCCGCGGAC GGGAGAGATG CTGTGGGACA TCGGCGGCGG CTCGGGCTCG 
GTCAGCGTCG AATGGTGCCT GAACGGCGGC CGGGCGGTGA CGCTGGAGCC CCGCACCGAC 
CGCATCGCCA ATATCGCCGC GAATATCAAG GCGTTCGGGC TGGCGGATCG GATGCGCGCC 
GTCCAAGGCG CGGCACCCGA TTTCCTCCAC GATCTTCCGG CACCCGATGC GATCTTTATC 
GGCGGCGGCG CTTCGGCCAC GCTGATCGAC GCCCTGCCCC CCGCCCGTCT GGTCGCGAAC 
GCGGTGACGC TGGAGACCGA GGCGCTGCTG ATCGGCCTGC ACGCGCAACG CGGCGGCAGC 
CTGACCCGCA TCGCGCTGGA GGAAGCCGTC CCGCTGGGCC GGATGCGCGG CTGGACCCCG 
GCGCGCAGCG TGACGCAATG GAGCTGGCCA TGA
 
Protein sequence
MADPWLSIIG IQEDGLAGLP PASRDALDRA EIVFGAPRHL ELAGIGGQRG RAWPVPFGLD 
PLLALRGESV AALVSGDPFW HGAGGSIAAV LQTGEWRAFP APGTFSLAAA RLGWRLEETA 
CLGLHAAPFA RLRPVMARGA RAICLLRDGT APAQLAEWLV AQGLGPTRMV VMEALGGPRE 
RIREARAQGF ALDCIAPVAV ALDGADLPSG AGLPRGFGLP DDSFAHDGQI TRRAIRAVTL 
AALGPRTGEM LWDIGGGSGS VSVEWCLNGG RAVTLEPRTD RIANIAANIK AFGLADRMRA 
VQGAAPDFLH DLPAPDAIFI GGGASATLID ALPPARLVAN AVTLETEALL IGLHAQRGGS 
LTRIALEEAV PLGRMRGWTP ARSVTQWSWP