Gene Pden_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2536 
Symbol 
ID4579841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2550622 
End bp2551350 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content72% 
IMG OID639769865 
Productprecorrin-3B C17-methyltransferase 
Protein accessionYP_916319 
Protein GI119385263 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1010] Precorrin-3B methylase 
TIGRFAM ID[TIGR01466] precorrin-3B C17-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.770841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCT GGGTCGCGGT GGCCGGCCTG GGGCCGGGCG CGGAGGATCT GGTCACGCCC 
GAGGTCAGGG CGGCGCTGGC CGAGGCCACC GATGTCGTCG GCTACATCCC CTATGTCGCC
CGCGTCGCAC CGCGTCCGGG GCTGGCGCTG CACCCCTCGG ACAACCGCGT CGAGCTGGAG
CGCGCGCGCC TTGCGCTGGA CCTGGCGGCG CGGGGGCGGC GGGTCGTGGT GGTCTCTTCG
GGCGATCCGG GGGTCTTTGC CATGGCCTCG GCGCTCTTCG AGGCGCTGGA GGGATGCGAG
AATACCCCCG ACATCCGCAT CCTGCCCGGC ATCACCGCCA TGCTGGCCGC AAGCGCCCGG
CTGGGCGCGC CCCTGGGCCA TGATTTCTGC GCCATCAACC TTTCGGACAA CCTCAAGCCC
TGGGCGCTGA TCGAAAAGCG CCTGCGGCTG GCGGCCGAGG CCGATTTCGC CATGGCCTTC
TACAATCCAC GCTCCAAGGC CCGGCCCGAG GGCTTTGCCC GCGTGCTCGA GATCCTGCGC
GAGGCTTGCG GTCCCGACCG GCTGATCTCG TTCGCGCGCG CCGTCTCGAC CCCGGACGAG
GCGCTGAACA CCGTCACCCT GGCCGAGGCC CGCCCCGAGA TGGCCGACAT GCGCACCGTG
GTCATCCTGG GCAACAGCGC CACCCGCCGG GCCGGCGCCT GGGTCTATAC GCCGCGATCC
GTGCCATGA
 
Protein sequence
MSGWVAVAGL GPGAEDLVTP EVRAALAEAT DVVGYIPYVA RVAPRPGLAL HPSDNRVELE 
RARLALDLAA RGRRVVVVSS GDPGVFAMAS ALFEALEGCE NTPDIRILPG ITAMLAASAR
LGAPLGHDFC AINLSDNLKP WALIEKRLRL AAEADFAMAF YNPRSKARPE GFARVLEILR
EACGPDRLIS FARAVSTPDE ALNTVTLAEA RPEMADMRTV VILGNSATRR AGAWVYTPRS
VP