Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2532 |
Symbol | cobN |
ID | 4579837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2544858 |
End bp | 2548028 |
Gene Length | 3171 bp |
Protein Length | 1056 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639769861 |
Product | cobaltochelatase subunit CobN |
Protein accession | YP_916315 |
Protein GI | 119385259 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.310665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGTCG TCTTTCGCGA AAGCCGTGGG CTTGAGGAAA CCGAGGTCCC GACCGACCCC GGCCAAAGCC CCGCCGACCT GGTCGTGCTG TCCTATTCGG ACAGCGACCT GGGCGCTTTC GCGGCAGGCT GGCACAGGGC TGGCGAGGGC CTGCCCGCGC TGCGGCTGTG CAACCTCTCG GCGCTGCGGC ATCCGGTTTC CGTCGATCAA TATTGCGAGG CCACGCTTTC CGGCGCCCGC GCCGTGCTGG TCCGGCTGAT CGGCGGCGAG CCCTATTGGC CTTACGGCAC AGCCAGCCTG CAGGATCTGG CGCGCAGGCG GGGCATCGCA CTGGCCTTCC TGCCGGCGGA CGGTCGGCCC GATCCGACGC TGGACCGCTT CTCGACCTTG CCGGTGCCGG TGCTGCGCCG GCTGGCGGCG CTTTGCGACG AAGGCGGCGC GGTCGCGGCG CAGATGGCAC TGGCGGAACT GGCGCAGGCG GCAGGACTGC CCGCCGCCCC GGTCCATGGC GAGGCCGCGA TCCCGCAATG GGGTTTCTAC GATCCCGACG CAGGCGTGAC CGCAGGCCCC ACGCCGGGCG AGGCCCCGGT GCTGGTCAGC TTCTATCGCA GCTACCTGAC CGCGGCCGAC CTTGCGCCGG TGGATGCGAT GATCCGGGCC CTGCGCGGGG CGGGCTTTGC CGCGACCGGG GTGTTCGCGC CCTCGCTCAA GGCACCGGGC TTTGCCGCTT GGCTGGCGCC GCATCTGTCC GGCCTTGCGG CGGTGGTGAA CCTGACCGCC TTTTCCGCGC GCGACGATGC GGGCGCCACG CCCTTCGACG GCACGGATTG CCCCGTGTTC CAGGTGGCGC TGTCCACCGC GCCCCGCGCC CTGTGGGCCG CCGAGGACCG GGGGCTTTCC GCCGCCGACC TGGCCATGCA TGTCGTGCTG CCCGAGGTCG ATGGCCGCAT CTTCCTGGGC GCCGTCAGCT TCAAGCAACC ACAGGTCCGC GACCCGGCGC TGGAGTTCTC GCGCCTGATC CACGCCCCGG ACATGGGCCG CATCAACGCG GCGGTGGCGC GGATCAAGGC ATGGCACCGG CTGCGGCAGG CGATGCGACG CGCCGTCGTG CTTTCCACCT ATCCCGGCAA GGCGCATCAA CTGGCCCATG CGGTGGGGCT GGACGCGTTG GCGTCGACCG GCACAATCCT TGGCATCCCG CATGACGACT TGGGCCGCCG CATGACGACC GAACGCATCC ACTGGCCGCT CTCGGACTAC CGCAAGGCGC TGGCCACCCT GCCACAACGC CTGCAAGACG ACCTGCGCGC GGCATGGGGC GAACCGCCGC CCGACGGCTT CCGCTTCGCC GCCATCCGCC ACGGCGCCGA CCTGATCGCC CTGCAGCCCG AGCGCGGCGA GGTGAAAACC CGCGCCGACG AGTACCACGA CCTGACGCGC ACCCCGCGCC ATGAATATGT CGCGTTCTAC CTCTGGCTGC GGACCCAGGC GGACGCCATG ATCCACATGG GCGCGCATGG CACGCTGGAA TGGCTGCCGG GGAAATCCGT GGCGCTGTCC GGGGAATGCT GGCCCGAGGC GCTGCTGGAC GACCTGCCGG TGATCTATCC CTTCATCGTC AACGATCCCG GCGAGGCCGC GCAGGCCAAG CGCCGGCTTT CGGCCGTGAC GCTGGGCCAC CTGCCGCCGC CGCTCGTGGA CTCGGGCGTC CCCGAAAACC TGACGCATCT GGAACGGCTG CTGGACGAAT ATTCCACAGC CGACGGGCTG GACCCCCGCC GCCGCGACCG GCTGATCCTC GCCATCCGCG ACGAGGCCCG CGCCGCCGGG GTCGAGGCCG ATCTTGGCCT GCCCCCCGAT GCGGCACCGG CCGAAGCGAT CCCGCTGATC GACCGCTTCC TTTGCGATCT CAAGGACAGC CGCTTCGGCG ATGGGCTGCA CGTCTATGGC ACCGGCCCCT GTGGCAAGGC CGAACGCGAC GGGCTGGCCG GTGCGCTCGC CGGCAAGCGG GTGGCGCCCG GCCCCTCGGG CTCGCCGGCG CGCGGGCGGC AGGACGTGCT GCCGACCGGG CGCAACCTCT TCGCCGTCGA TCCGCGCGCC GTGCCCTCGC GCGCCGCCCA CGCGCAAGGG GTGAAGCTGG CCGAGGAACT GTTGCGCCGC CACTTGCAGG ACCATGGCGA CTGGCCCAAG GGGCTGGTCG TGGACCTGTG GGGCAGCGCC ACCATGCGCA CGGCAGGCGA GGAATTCGCC ATGGCGCTGC ATCTGGCCGG TCTCAGCCCG CGCTGGGATG CCGCCTCGGG CCGCGTCGCG GGCATCGAGA TCCTGCCTTT GGCCGAACTG GGCCGACCAC GGATCGACGT GACGCTGCGG GTCTCGGGGC TCTTTCGCGA CATCTTCCCC GGCCTCGCGC AACTCTTCGA AACTGGTGCC GAGGCGCTGG CCACCCGCGA CGAGGCGCCC GGGGACAACC CCTATCGCAG CCGCGCCCCT CGCGTCTTCG GCCCCAAGCC CGGTCTCTAC GGCCTTGGCA TCGCCGAACT GGCCGAGACC TTCACGGATG CGGCGCGGCA GGCGGCGGGC GAGGCATGGC TTGCCGCCTC GTCCCACGCC ATCGGCGCCG ATGGCCGGAT CAGCCATCAG CCGCAGGCGA TCCGCGACCG CCTGGCCGGG GCCGATGCCT TCGTCCATGC GCAGGACCTG CCGGAATCAG ACCTGCTGCT GGCCGGCGAC TATGCCGCGC ACGAGGCGGG CTTCGCCGCC GCCATGGCGC GGATCGGCGC AGCCGCACCC GCGCTTTACC ACCTGGACGC GACCCGGCCC GACCAGCCCC GCGCCCGCAG CCTGACCGAG GAAATCGCCC GCGTCACCCG CGCCCGCGCC GCCAATCCGG CCTGGGCCGA CGGCATGATG CGGCACGGCT TCCGCGGCGC GGCCGAGATC GCGGCTACGC TCGATCACAT GGCCGCATTC GCCAATCTGG CGGGCGTGGT GCCCGGTCAC CTGTTCGATC TCTATCACGA CGCGACGCTG GGCCGGCCCG AGGTCGTGGC CTTCATGGAG CGCGAGAATC CGCAGGCACT CGCCGCCATG CGCGCCATGT TCGCGCAGCT GCTGGAATCG GGCCTCTGGG CCACGCGGCG CAACTCGGTG CTGGCCGAGG CGGCGCCATG A
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Protein sequence | MHVVFRESRG LEETEVPTDP GQSPADLVVL SYSDSDLGAF AAGWHRAGEG LPALRLCNLS ALRHPVSVDQ YCEATLSGAR AVLVRLIGGE PYWPYGTASL QDLARRRGIA LAFLPADGRP DPTLDRFSTL PVPVLRRLAA LCDEGGAVAA QMALAELAQA AGLPAAPVHG EAAIPQWGFY DPDAGVTAGP TPGEAPVLVS FYRSYLTAAD LAPVDAMIRA LRGAGFAATG VFAPSLKAPG FAAWLAPHLS GLAAVVNLTA FSARDDAGAT PFDGTDCPVF QVALSTAPRA LWAAEDRGLS AADLAMHVVL PEVDGRIFLG AVSFKQPQVR DPALEFSRLI HAPDMGRINA AVARIKAWHR LRQAMRRAVV LSTYPGKAHQ LAHAVGLDAL ASTGTILGIP HDDLGRRMTT ERIHWPLSDY RKALATLPQR LQDDLRAAWG EPPPDGFRFA AIRHGADLIA LQPERGEVKT RADEYHDLTR TPRHEYVAFY LWLRTQADAM IHMGAHGTLE WLPGKSVALS GECWPEALLD DLPVIYPFIV NDPGEAAQAK RRLSAVTLGH LPPPLVDSGV PENLTHLERL LDEYSTADGL DPRRRDRLIL AIRDEARAAG VEADLGLPPD AAPAEAIPLI DRFLCDLKDS RFGDGLHVYG TGPCGKAERD GLAGALAGKR VAPGPSGSPA RGRQDVLPTG RNLFAVDPRA VPSRAAHAQG VKLAEELLRR HLQDHGDWPK GLVVDLWGSA TMRTAGEEFA MALHLAGLSP RWDAASGRVA GIEILPLAEL GRPRIDVTLR VSGLFRDIFP GLAQLFETGA EALATRDEAP GDNPYRSRAP RVFGPKPGLY GLGIAELAET FTDAARQAAG EAWLAASSHA IGADGRISHQ PQAIRDRLAG ADAFVHAQDL PESDLLLAGD YAAHEAGFAA AMARIGAAAP ALYHLDATRP DQPRARSLTE EIARVTRARA ANPAWADGMM RHGFRGAAEI AATLDHMAAF ANLAGVVPGH LFDLYHDATL GRPEVVAFME RENPQALAAM RAMFAQLLES GLWATRRNSV LAEAAP
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