Gene Pden_2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2532 
SymbolcobN 
ID4579837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2544858 
End bp2548028 
Gene Length3171 bp 
Protein Length1056 aa 
Translation table11 
GC content72% 
IMG OID639769861 
Productcobaltochelatase subunit CobN 
Protein accessionYP_916315 
Protein GI119385259 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases 
TIGRFAM ID[TIGR02257] cobaltochelatase, CobN subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.310665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTCG TCTTTCGCGA AAGCCGTGGG CTTGAGGAAA CCGAGGTCCC GACCGACCCC 
GGCCAAAGCC CCGCCGACCT GGTCGTGCTG TCCTATTCGG ACAGCGACCT GGGCGCTTTC
GCGGCAGGCT GGCACAGGGC TGGCGAGGGC CTGCCCGCGC TGCGGCTGTG CAACCTCTCG
GCGCTGCGGC ATCCGGTTTC CGTCGATCAA TATTGCGAGG CCACGCTTTC CGGCGCCCGC
GCCGTGCTGG TCCGGCTGAT CGGCGGCGAG CCCTATTGGC CTTACGGCAC AGCCAGCCTG
CAGGATCTGG CGCGCAGGCG GGGCATCGCA CTGGCCTTCC TGCCGGCGGA CGGTCGGCCC
GATCCGACGC TGGACCGCTT CTCGACCTTG CCGGTGCCGG TGCTGCGCCG GCTGGCGGCG
CTTTGCGACG AAGGCGGCGC GGTCGCGGCG CAGATGGCAC TGGCGGAACT GGCGCAGGCG
GCAGGACTGC CCGCCGCCCC GGTCCATGGC GAGGCCGCGA TCCCGCAATG GGGTTTCTAC
GATCCCGACG CAGGCGTGAC CGCAGGCCCC ACGCCGGGCG AGGCCCCGGT GCTGGTCAGC
TTCTATCGCA GCTACCTGAC CGCGGCCGAC CTTGCGCCGG TGGATGCGAT GATCCGGGCC
CTGCGCGGGG CGGGCTTTGC CGCGACCGGG GTGTTCGCGC CCTCGCTCAA GGCACCGGGC
TTTGCCGCTT GGCTGGCGCC GCATCTGTCC GGCCTTGCGG CGGTGGTGAA CCTGACCGCC
TTTTCCGCGC GCGACGATGC GGGCGCCACG CCCTTCGACG GCACGGATTG CCCCGTGTTC
CAGGTGGCGC TGTCCACCGC GCCCCGCGCC CTGTGGGCCG CCGAGGACCG GGGGCTTTCC
GCCGCCGACC TGGCCATGCA TGTCGTGCTG CCCGAGGTCG ATGGCCGCAT CTTCCTGGGC
GCCGTCAGCT TCAAGCAACC ACAGGTCCGC GACCCGGCGC TGGAGTTCTC GCGCCTGATC
CACGCCCCGG ACATGGGCCG CATCAACGCG GCGGTGGCGC GGATCAAGGC ATGGCACCGG
CTGCGGCAGG CGATGCGACG CGCCGTCGTG CTTTCCACCT ATCCCGGCAA GGCGCATCAA
CTGGCCCATG CGGTGGGGCT GGACGCGTTG GCGTCGACCG GCACAATCCT TGGCATCCCG
CATGACGACT TGGGCCGCCG CATGACGACC GAACGCATCC ACTGGCCGCT CTCGGACTAC
CGCAAGGCGC TGGCCACCCT GCCACAACGC CTGCAAGACG ACCTGCGCGC GGCATGGGGC
GAACCGCCGC CCGACGGCTT CCGCTTCGCC GCCATCCGCC ACGGCGCCGA CCTGATCGCC
CTGCAGCCCG AGCGCGGCGA GGTGAAAACC CGCGCCGACG AGTACCACGA CCTGACGCGC
ACCCCGCGCC ATGAATATGT CGCGTTCTAC CTCTGGCTGC GGACCCAGGC GGACGCCATG
ATCCACATGG GCGCGCATGG CACGCTGGAA TGGCTGCCGG GGAAATCCGT GGCGCTGTCC
GGGGAATGCT GGCCCGAGGC GCTGCTGGAC GACCTGCCGG TGATCTATCC CTTCATCGTC
AACGATCCCG GCGAGGCCGC GCAGGCCAAG CGCCGGCTTT CGGCCGTGAC GCTGGGCCAC
CTGCCGCCGC CGCTCGTGGA CTCGGGCGTC CCCGAAAACC TGACGCATCT GGAACGGCTG
CTGGACGAAT ATTCCACAGC CGACGGGCTG GACCCCCGCC GCCGCGACCG GCTGATCCTC
GCCATCCGCG ACGAGGCCCG CGCCGCCGGG GTCGAGGCCG ATCTTGGCCT GCCCCCCGAT
GCGGCACCGG CCGAAGCGAT CCCGCTGATC GACCGCTTCC TTTGCGATCT CAAGGACAGC
CGCTTCGGCG ATGGGCTGCA CGTCTATGGC ACCGGCCCCT GTGGCAAGGC CGAACGCGAC
GGGCTGGCCG GTGCGCTCGC CGGCAAGCGG GTGGCGCCCG GCCCCTCGGG CTCGCCGGCG
CGCGGGCGGC AGGACGTGCT GCCGACCGGG CGCAACCTCT TCGCCGTCGA TCCGCGCGCC
GTGCCCTCGC GCGCCGCCCA CGCGCAAGGG GTGAAGCTGG CCGAGGAACT GTTGCGCCGC
CACTTGCAGG ACCATGGCGA CTGGCCCAAG GGGCTGGTCG TGGACCTGTG GGGCAGCGCC
ACCATGCGCA CGGCAGGCGA GGAATTCGCC ATGGCGCTGC ATCTGGCCGG TCTCAGCCCG
CGCTGGGATG CCGCCTCGGG CCGCGTCGCG GGCATCGAGA TCCTGCCTTT GGCCGAACTG
GGCCGACCAC GGATCGACGT GACGCTGCGG GTCTCGGGGC TCTTTCGCGA CATCTTCCCC
GGCCTCGCGC AACTCTTCGA AACTGGTGCC GAGGCGCTGG CCACCCGCGA CGAGGCGCCC
GGGGACAACC CCTATCGCAG CCGCGCCCCT CGCGTCTTCG GCCCCAAGCC CGGTCTCTAC
GGCCTTGGCA TCGCCGAACT GGCCGAGACC TTCACGGATG CGGCGCGGCA GGCGGCGGGC
GAGGCATGGC TTGCCGCCTC GTCCCACGCC ATCGGCGCCG ATGGCCGGAT CAGCCATCAG
CCGCAGGCGA TCCGCGACCG CCTGGCCGGG GCCGATGCCT TCGTCCATGC GCAGGACCTG
CCGGAATCAG ACCTGCTGCT GGCCGGCGAC TATGCCGCGC ACGAGGCGGG CTTCGCCGCC
GCCATGGCGC GGATCGGCGC AGCCGCACCC GCGCTTTACC ACCTGGACGC GACCCGGCCC
GACCAGCCCC GCGCCCGCAG CCTGACCGAG GAAATCGCCC GCGTCACCCG CGCCCGCGCC
GCCAATCCGG CCTGGGCCGA CGGCATGATG CGGCACGGCT TCCGCGGCGC GGCCGAGATC
GCGGCTACGC TCGATCACAT GGCCGCATTC GCCAATCTGG CGGGCGTGGT GCCCGGTCAC
CTGTTCGATC TCTATCACGA CGCGACGCTG GGCCGGCCCG AGGTCGTGGC CTTCATGGAG
CGCGAGAATC CGCAGGCACT CGCCGCCATG CGCGCCATGT TCGCGCAGCT GCTGGAATCG
GGCCTCTGGG CCACGCGGCG CAACTCGGTG CTGGCCGAGG CGGCGCCATG A
 
Protein sequence
MHVVFRESRG LEETEVPTDP GQSPADLVVL SYSDSDLGAF AAGWHRAGEG LPALRLCNLS 
ALRHPVSVDQ YCEATLSGAR AVLVRLIGGE PYWPYGTASL QDLARRRGIA LAFLPADGRP
DPTLDRFSTL PVPVLRRLAA LCDEGGAVAA QMALAELAQA AGLPAAPVHG EAAIPQWGFY
DPDAGVTAGP TPGEAPVLVS FYRSYLTAAD LAPVDAMIRA LRGAGFAATG VFAPSLKAPG
FAAWLAPHLS GLAAVVNLTA FSARDDAGAT PFDGTDCPVF QVALSTAPRA LWAAEDRGLS
AADLAMHVVL PEVDGRIFLG AVSFKQPQVR DPALEFSRLI HAPDMGRINA AVARIKAWHR
LRQAMRRAVV LSTYPGKAHQ LAHAVGLDAL ASTGTILGIP HDDLGRRMTT ERIHWPLSDY
RKALATLPQR LQDDLRAAWG EPPPDGFRFA AIRHGADLIA LQPERGEVKT RADEYHDLTR
TPRHEYVAFY LWLRTQADAM IHMGAHGTLE WLPGKSVALS GECWPEALLD DLPVIYPFIV
NDPGEAAQAK RRLSAVTLGH LPPPLVDSGV PENLTHLERL LDEYSTADGL DPRRRDRLIL
AIRDEARAAG VEADLGLPPD AAPAEAIPLI DRFLCDLKDS RFGDGLHVYG TGPCGKAERD
GLAGALAGKR VAPGPSGSPA RGRQDVLPTG RNLFAVDPRA VPSRAAHAQG VKLAEELLRR
HLQDHGDWPK GLVVDLWGSA TMRTAGEEFA MALHLAGLSP RWDAASGRVA GIEILPLAEL
GRPRIDVTLR VSGLFRDIFP GLAQLFETGA EALATRDEAP GDNPYRSRAP RVFGPKPGLY
GLGIAELAET FTDAARQAAG EAWLAASSHA IGADGRISHQ PQAIRDRLAG ADAFVHAQDL
PESDLLLAGD YAAHEAGFAA AMARIGAAAP ALYHLDATRP DQPRARSLTE EIARVTRARA
ANPAWADGMM RHGFRGAAEI AATLDHMAAF ANLAGVVPGH LFDLYHDATL GRPEVVAFME
RENPQALAAM RAMFAQLLES GLWATRRNSV LAEAAP