Gene Pden_2525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2525 
Symbol 
ID4580163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2540187 
End bp2540885 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID639769854 
Productcobalt transporter, subunit CbtA 
Protein accessionYP_916308 
Protein GI119385252 
COG category[S] Function unknown 
COG ID[COG5446] Predicted integral membrane protein 
TIGRFAM ID[TIGR02458] cobalt transporter subunit CbtA (proposed) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCGC GCATTCTGAC CAGCGGATTG ATCGCTGGCG CTGTAACGGG GCTGATTGCC 
GCCCTGTTGC AGCTTTGGTT CGTGCAGCCC GTGCTGCTGC ATGCCGAGCT GTACGAATCC
GGCCAACTGG CGCATTTCGG TGCCGAAACC GTCAGCGCGC ATCAGGATCC GGGGCCGTTC
GAATGGACCC GCAACATGCT TTCGGTCCTG TTCACCATGA TGGTCTATGC CGGCTACGGG
CTGATGCTGG TGGCGCTGAT GGCGGTTTCC GAATCGCAGG GCAATGCGGT CACCGCGCGG
CAGGGGTTGC TTTGGGGGCT TGCCGGCTAC CTGACCATGC AGCTTGCCCC CGCCTTCGGT
CTTGCCCCCG AGGTGCCGGG CGTCGCCGCC GCCGATGTGC AGGTCCGCGC CATCTGGTGG
CTGGGCACGG CGCTGGCCAC CGGGCTTGCG CTGTGGCTGA TCGCCTTTGG CAAGGGCTGG
GCGGCCTGGG GCGTGGCGGT CGTGCTGCTC CTGGCGCCGC ATGTGATCGG CGCACCACAG
CCCGACAGCT ATGCCGGCCC GGTCCCGCCC GAGCTTTCGG CCGAGTTCGC CGGCCGCGCG
CTGGGTGCCG GCGCCATGGC CTGGGTGCTT CTGGGCCTGC TGGCCGGCTG GTTCTGGCAG
CGCGAAAGCC AAAGCGCGCC GGTTCCGCAA GCCGCCTGA
 
Protein sequence
MFSRILTSGL IAGAVTGLIA ALLQLWFVQP VLLHAELYES GQLAHFGAET VSAHQDPGPF 
EWTRNMLSVL FTMMVYAGYG LMLVALMAVS ESQGNAVTAR QGLLWGLAGY LTMQLAPAFG
LAPEVPGVAA ADVQVRAIWW LGTALATGLA LWLIAFGKGW AAWGVAVVLL LAPHVIGAPQ
PDSYAGPVPP ELSAEFAGRA LGAGAMAWVL LGLLAGWFWQ RESQSAPVPQ AA