| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2520 |
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| Symbol | |
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| ID | 4580158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2535943 |
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| End bp | 2537379 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639769849 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_916303 |
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| Protein GI | 119385247 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA ACACGAACGC GGGCGCGCCC CGCACCCTCT ACGACAAGAT CTTCGACGCC
CATGTGGTCG AGCGTTCCGA CGACGGCACC TGCATCCTCT ATATCGACCG TCACCTGGTG
CATGAGGTGA CTTCGCCCCA GGCATTCGAG GGGCTGCGCA TGGCCGGGCG CAAGGTGCGC
CGTCCCGACC AGACCATCGC GGTGCCGGAC CACAACGTGC CGACCACGCC CGACCGCGTG
AACGGCATCG AGAACCCCGA GGGCCGCATC CAGGTCGCCG AACTGGACAA GAACGCCCGT
GAATTCGGGC TGAACTACTA TCCGATGTCG GACATCCGCC AAGGCATAGT GCATATCGTC
GGCCCCGAAC AGGGCTGGAC CCTGCCCGGC ATGACCGTGG TTTGCGGCGA CAGCCATACC
GCGACGCATG GCGCCTTCGG CGCATTGGCG CACGGCATCG GCACCTCGGA AGTGGAACAC
GTCCTGGCCA CCCAGACGCT GATCCAGAAG AAGTCCAGGA ACATGAAGGT CGAGATCACC
GGCAAGCTGC GCCCGGGCGT GACCGCCAAG GACATCACCC TGTCGGTGAT CGGCGCGACC
GGCACCGCCG GCGGCACCGG CTATGTCATC GAATATTGCG GCGAGGCGAT CCGCGACCTG
TCGATGGAAG GCCGCATGAC CGTCTGCAAC ATGGCGATCG AGGGCGGCGC CCGCGCCGGC
CTGATCGCCC CCGACGAAAA GACCTTCGAA TACGTCAAGG GCCGCCCCCA CGCCCCGAAG
GGCGCCGCAT GGGAGGCCGC GCAGGCCTGG TGGAAGACGC TGTTCAGCGA CGAGGGCGCG
CATTGGGACA AGGTCGTCAC CATCCGCGGC GAGGACATCG CCCCGGTGGT GACCTGGGGC
ACCTCGCCCG AGGACGTGCT GCCGATCACC GGCAAGGTTC CCGCCCCCGA GGATTTCGAG
GGCGGCAAGG TCGAGGCCGC GCGCCGCAGC CTGGACTACA TGGGGCTGAA GCCCGGCACG
CCGCTGAACG AGATCAGGAT CGACGCGGTC TTCATCGGGT CCTGCACCAA CGGCCGGATC
GAGGACCTGC GCGCCGCTGC CGGGATCCTC AAGGGCCACA AGCTGGCGCC GGGCGTGCGC
GGCATGGTCG TGCCCGGCTC GGGCCTCGTG CGCATGCAGG CCGAGGAAGA GGGTCTGGAC
AATATCTTCA TCGACGCGGG CTTCGAATGG CGCCTGGCCG GCTGCTCGAT GTGCCTGGGC
ATGAACCCCG ACCAGCTGGC ACCGGGCGAA CGCTGCGCCG CGACCTCGAA CCGCAATTTC
GAGGGGCGGA TGGGCCGTGG CGGCCGCACG CATCTGATGT CGCCGGTGAT GGCGGCGGCT
GCGGGCATCA AGGGCCACCT GACCGACGTG CGCGAGTTGC TGGCGGAAAC CGTCTGA
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| Protein sequence | MTGNTNAGAP RTLYDKIFDA HVVERSDDGT CILYIDRHLV HEVTSPQAFE GLRMAGRKVR
RPDQTIAVPD HNVPTTPDRV NGIENPEGRI QVAELDKNAR EFGLNYYPMS DIRQGIVHIV
GPEQGWTLPG MTVVCGDSHT ATHGAFGALA HGIGTSEVEH VLATQTLIQK KSRNMKVEIT
GKLRPGVTAK DITLSVIGAT GTAGGTGYVI EYCGEAIRDL SMEGRMTVCN MAIEGGARAG
LIAPDEKTFE YVKGRPHAPK GAAWEAAQAW WKTLFSDEGA HWDKVVTIRG EDIAPVVTWG
TSPEDVLPIT GKVPAPEDFE GGKVEAARRS LDYMGLKPGT PLNEIRIDAV FIGSCTNGRI
EDLRAAAGIL KGHKLAPGVR GMVVPGSGLV RMQAEEEGLD NIFIDAGFEW RLAGCSMCLG
MNPDQLAPGE RCAATSNRNF EGRMGRGGRT HLMSPVMAAA AGIKGHLTDV RELLAETV
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