| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2515 |
|---|
| Symbol | |
|---|
| ID | 4580153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2532699 |
|---|
| End bp | 2533553 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639769844 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_916298 |
|---|
| Protein GI | 119385242 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
|---|
| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.921995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGGT TTCTGCCAGA GGATCGGATG ACGGAACTTG ACGAGCGCAG CCACCCGTTT
CGCGACAGCC ATCAGGACGT GGAGGCGGCG CGGACCATCC CCGACACGGC CCAGACGCGC
GCGCCGGCCT ATCGGCTGGC CTTTACCGAT TCCGAATTCC TGCTGCGCGA GGAACTGCGC
CCGGTGCGGT TGCAGCTCGA ACTGCTGAAG CCGCAGATGA TCATGGATGC GCGCGGCATC
CGCTCGACCG TGGTGATGTT CGGCGGCGCC CGCATCCCCT CGCCCGACCG GCGCGAGGGC
GCGCGCACGC CGGCGCTGGC CGCCCTGTCG CATTACTATG ACGAGGCCCG GCGCTTTGCC
CGGCTGATGA CCGAACGCAG CCTGAAAAGC TATGGCGCCG AGGATGTGAT CTGCACCGGC
GGCGGTCCGG GGGTGATGGA GGCCGGCAAC CTGGGCGCGC ACGAAGCCGG GGGCGCCTCG
ATCGGCCTGT CCATCGTGCT GCCGCATGAA CAGACGCCGA ATGCCTATGT GACGCCGGAC
CTGTGCTTCA ATTTCCACTA TTTCGCCATT CGCAAGATGC ATTTCCTGAT GCGGGCCAAG
GCGGTTACGG TCTTTCCGGG CGGCTTCGGC ACCATGGACG AGATGTTCGA GGCGCTGACC
CTGATCCAGA CCGGCCGCAT GAGGCGCATC CCCTTCATCC TGTTCGGGCC GGAATTCTGG
CACAAGGTCA TCAACTGGGA GGCGCTGGCC GAGGCCGGCA CGATCAGCCC CGAAGATCTG
GAGCTGATCA GCTTCGTCGA AAGCGCCGAC GAGGCGGTCG AGATCATCGA CAATTGGGTC
GTACCCTGCC CCTGA
|
|---|
| Protein sequence | MRRFLPEDRM TELDERSHPF RDSHQDVEAA RTIPDTAQTR APAYRLAFTD SEFLLREELR
PVRLQLELLK PQMIMDARGI RSTVVMFGGA RIPSPDRREG ARTPALAALS HYYDEARRFA
RLMTERSLKS YGAEDVICTG GGPGVMEAGN LGAHEAGGAS IGLSIVLPHE QTPNAYVTPD
LCFNFHYFAI RKMHFLMRAK AVTVFPGGFG TMDEMFEALT LIQTGRMRRI PFILFGPEFW
HKVINWEALA EAGTISPEDL ELISFVESAD EAVEIIDNWV VPCP
|
|---|
| |