| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2514 |
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| Symbol | dapD |
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| ID | 4580152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2531809 |
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| End bp | 2532633 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639769843 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_916297 |
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| Protein GI | 119385241 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.61734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATG ACGCCCTTGA AGCCGCCATC GAATCCGCCT GGGAGATCCG CGACCAGATC
ACCCCCGCCA CCAGGGGCGA GGTGCGCGAT GCCGTCGAGG CCACGCTGGA GGCGCTGGAC
AAGGGTGTGC TGCGCGTCGC CGAAAAGCGC GGCAGCGACT GGCATGTGAA CCAATGGGCG
AAAAAGGCCG TGCTGCTGGG CTTTCGCCTC AAGGACATGG AGGTCCACAT GGGCGGGCCG
CAAGGCGGCA CCTGGTGGGA CAAGGTGGAC AGCAAGTTCG CCCATTGGGG CGAGGCGCAA
TGGCAGGCCG CCGGCTTTCG TGCCGTGCCG AACTGCGTCG TGCGCCGCTC GGCCTATATC
GCCAAGGGCG TGGTGCTGAT GCCCAGCTTC GTGAACCTGG GCGCCTATGT CGACGAGGGC
ACCATGGTCG ATACCTGGGC CACCGTCGGC TCTTGCGCGC AGATCGGCAA GAACGTGCAC
CTGTCGGGCG GCGTCGGCAT CGGCGGCGTG CTGGAGCCGA TGCAGGCCGG CCCGACCATC
ATCGAGGACA ATTGCTTCAT CGGCGCCCGT TCCGAGGTGG TCGAGGGCTG CATCGTGCGC
GAGGGCTCGG TCCTGGGCAT GGGCGTCTTC ATCGGCAAAT CGACCAAGAT CGTGGACCGC
GAGACCGGCG AGGTCATGTA TGGCGAGGTT CCGGCGGGTT CGGTGGTCGT CGCCGGCTCG
ATGCCCTCGA AGAACGGTGT GAACCTGTAT TGTGCGGTGA TCGTCAAGCG CGTCGATGCG
CAGACCCGTT CCAAGACCTC GATCAACGAG CTTTTGCGCG ACTGA
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| Protein sequence | MSNDALEAAI ESAWEIRDQI TPATRGEVRD AVEATLEALD KGVLRVAEKR GSDWHVNQWA
KKAVLLGFRL KDMEVHMGGP QGGTWWDKVD SKFAHWGEAQ WQAAGFRAVP NCVVRRSAYI
AKGVVLMPSF VNLGAYVDEG TMVDTWATVG SCAQIGKNVH LSGGVGIGGV LEPMQAGPTI
IEDNCFIGAR SEVVEGCIVR EGSVLGMGVF IGKSTKIVDR ETGEVMYGEV PAGSVVVAGS
MPSKNGVNLY CAVIVKRVDA QTRSKTSINE LLRD
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