Gene Pden_2499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2499 
Symbol 
ID4580137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2518051 
End bp2518704 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID639769828 
Productputative translaldolase 
Protein accessionYP_916282 
Protein GI119385226 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.90981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT TTGTTGATAC CGCCGACGTC GCCGCCATCC GCGAGCTGAA CGACCTTGGC 
ATGGTGGACG GCGTCACCAC CAACCCGTCG CTGATCCTGA AATCGGGCCG CGACATCCTT
GAGGTCACCA AGGAAATCTG CGACATCGTC GAGGGCCCGG TCAGCGCCGA AGTCGTCGCA
AGCAAGGCCG GGGACATGAT CCGCGAGGGC GAGCATCTGG TGAAGATCGC CCCGAACATC
ACCGTCAAGG TGCCGCTGAC CTGGGACGGG CTCAGGGCCT GCAAGGTGCT GTCGTCGCAG
GGACACAAGG TCAACGTGAC GCTGTGCTTC TCGGCCGCGC AGGCGATCCT GGCCGCCAAG
GCCGGCGCCA CCTTCATCAG CCCCTTCATC GGCCGGCTCG ACGACATCAA CTTCGACGGC
ATGGAACTGA TCGCCCAGAT CCGCGAGATC TATGACAATT ACGACTTCCA GACCCAGATC
CTGGCGGCCT CGATCCGCTC GGTGAACCAC ATCACCGACG CCGCCCGCAT CGGCGCCGAC
GTGATCACCG CGCCGCCCGC CGTCATCAAG GCGATGGCGA ATCACGTGCT GACCGACAAG
GGCCTGGAAC AGTTCAACGC CGACTGGGCC AAGACCGGGC AGAAGATCGT CTGA
 
Protein sequence
MKFFVDTADV AAIRELNDLG MVDGVTTNPS LILKSGRDIL EVTKEICDIV EGPVSAEVVA 
SKAGDMIREG EHLVKIAPNI TVKVPLTWDG LRACKVLSSQ GHKVNVTLCF SAAQAILAAK
AGATFISPFI GRLDDINFDG MELIAQIREI YDNYDFQTQI LAASIRSVNH ITDAARIGAD
VITAPPAVIK AMANHVLTDK GLEQFNADWA KTGQKIV