Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2486 |
Symbol | |
ID | 4580124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2501826 |
End bp | 2503871 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639769815 |
Product | FMN-binding domain-containing protein |
Protein accession | YP_916269 |
Protein GI | 119385213 |
COG category | [K] Transcription |
COG ID | [COG3901] Regulator of nitric oxide reductase transcription |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.821812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATGC CCGGAAAATC CTCTCATGCG CCTAGCCGCC TGCTGCTGGC GCTGCTGACA CTGATCCTGC TGGCCCTGCC GGCGCGGCCC GAGCCGCTTG CCGCCCCCGA TGCGGCACTG GCGCAGGCGC TGTTCGGCGC GGACGGGCCG GTGGTGCTGG ACCGCCGCGA AACGCCGGTG CCGGGCTGGG GGGTCAGCCG CGACGGCCGG ATGCTGGGCG TGATCGGCTC GACCTGGGAG ATCGCGGCGA CCACCGGCTA TTCCGGCAAG CCGCTGGACG TGCTGGTCGC GGTCACGCCG CAGGGCGTGA TCGCCGGCGC CAGACTGGTG CGCCAGACCG AGCCGGTGCT GAGCCTTGGC ATTTCCGAAG CGCATATCGC CGCCTATGTG GACGGGTTTC GCGGCGTCGA TCTGTCGCAG GGCGAAGGGC AGGGACGGGC GCTGCCCGAC GTGATCTCGC GCGCCACGGT TTCGACCGGG GTGATCCGCG ACGGCATCCT GCGCAGCGCC CGGGTGCTGG CGCAGGCGCA GGGGCTGGGT GGCGGCGGCA TCGACCGGGT CGGCTATCGC CCCGCGACAT GGGCCGATCT GCTGGCCGAG GGGGCATTCG GCCATGCGCT GGTCTCGATG GCCGATGCGG CGCGCGCCTT CGCGGGTGCC AAGGTGCCGG TCGAGCCTTC GGACGCGCCG TTCCTGGACC TTTACGCCGG GCTGATCGAC CCGCCGACCG TCGGCCGCAA CCTGTTGGGC GCGCAGGACT TCACCGCCGC GGCAGGCGCG CTGCAACCCG GTCAGGCGCT GGTCGCGGTG CTGTCGCGCG GCCTTTACAG CCCGCGCGGC ACGGAATGGC GCCGCTCGGG CCGGTTCGAG CGCATCGCCT TTGAACAGGG CGCGTTGCGG ATCGAACCGG ACGACGGCGA TTTCGTCATG GTCGAGAAGC TTGCCCTGCC CGATGCGCCG GCCTTCAAGG AAATCAGCCT GTTTCGGCTG AACATCGACC CCCTGGCCGG CGGCATCGAC CCGCGCCGGC CCTTCGACCT GGTGGTGACC GCGACCCGGC CGCTTGCCGC GGGGGACGAG GCCGCGCTGC CCATCCGCGC CACCATCCGC CTGCCCGAAG CCTATGCCGT CGCCGAGGCC CCCGCCGTTC CGCTGTGGCA GGAGTTCTGG CTGAAGAAGA TCCCCGGCAT CGCCGTGGTC GCGGCCATGC TGTTCGTGCT GGCGCTGATC CTGTTCGGGC AAGAGGCGCT GGTGCGCCGG CCGATGCTGT GGCGGCGGGT GCGGCTGGGC TTTCTGGCCA CGACGCTGGT GGTGCTGGGC TGGGGGCTGA ACGGCCAGCT TTCGGTGGTG CAGGTGGTGG CCTTCCTGAA CGCGCTGTTG TCCGGCTTTC GCTGGGAGAC GTTCCTGATC GAGCCGATCA TCTTCCTGAT CTGGTCCGCC GTCGCCTTGG GCCTGCTGTT CTGGGGCCGC GGCGTGTTCT GCGGCTGGCT GTGCCCCTTT GGCGCGCTGC AAGAGCTGGC CAATGCCGCT GCGCAGCGGC TGGGGGTGCG GCAGATCGCC GTGCCGCAGG CCCTGCACGA ACGGCTCTGG GTGATCAAGT ACACGCTTTT CGTCGCCATC GTCGCGCTCA GCTTCTACAG CATGGAGCAG GCGCTGATCC TGGCCGAGGT CGAGCCGTTC AAGACGGTGA TCTCGATGCG CTTCCTGCGC GCCTGGCCCT TCGTGCTGTT CGCCTTGGCG GTGCTGGCGG GCGGATTGTT CATCGAGCGG TTCTATTGCC GCTACCTGTG CCCTCTGGGG GCGGGGCTGG CGATCCCGGC CAAGCTGAAG ATCTTCGACT GGCTGCGCCG CCGCCCGCAA TGCGGCCGCG AATGCCGGCT GTGCGAGACG AAATGCACTG TCGGCGCCAT CGACCCCCTG GGCCGGATCA ATCCCAACGA ATGCGTGCTG TGCCTGCGCT GCCAGGTGGT GATGAACGAC CCCGGCACCT GCCCGGTGCT GAAGCGCCGC GCCCGCAGCG CCGCCCCGAC CGGAGATGCG CCATGA
|
Protein sequence | MAMPGKSSHA PSRLLLALLT LILLALPARP EPLAAPDAAL AQALFGADGP VVLDRRETPV PGWGVSRDGR MLGVIGSTWE IAATTGYSGK PLDVLVAVTP QGVIAGARLV RQTEPVLSLG ISEAHIAAYV DGFRGVDLSQ GEGQGRALPD VISRATVSTG VIRDGILRSA RVLAQAQGLG GGGIDRVGYR PATWADLLAE GAFGHALVSM ADAARAFAGA KVPVEPSDAP FLDLYAGLID PPTVGRNLLG AQDFTAAAGA LQPGQALVAV LSRGLYSPRG TEWRRSGRFE RIAFEQGALR IEPDDGDFVM VEKLALPDAP AFKEISLFRL NIDPLAGGID PRRPFDLVVT ATRPLAAGDE AALPIRATIR LPEAYAVAEA PAVPLWQEFW LKKIPGIAVV AAMLFVLALI LFGQEALVRR PMLWRRVRLG FLATTLVVLG WGLNGQLSVV QVVAFLNALL SGFRWETFLI EPIIFLIWSA VALGLLFWGR GVFCGWLCPF GALQELANAA AQRLGVRQIA VPQALHERLW VIKYTLFVAI VALSFYSMEQ ALILAEVEPF KTVISMRFLR AWPFVLFALA VLAGGLFIER FYCRYLCPLG AGLAIPAKLK IFDWLRRRPQ CGRECRLCET KCTVGAIDPL GRINPNECVL CLRCQVVMND PGTCPVLKRR ARSAAPTGDA P
|
| |