Gene Pden_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2486 
Symbol 
ID4580124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2501826 
End bp2503871 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content70% 
IMG OID639769815 
ProductFMN-binding domain-containing protein 
Protein accessionYP_916269 
Protein GI119385213 
COG category[K] Transcription 
COG ID[COG3901] Regulator of nitric oxide reductase transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.821812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGC CCGGAAAATC CTCTCATGCG CCTAGCCGCC TGCTGCTGGC GCTGCTGACA 
CTGATCCTGC TGGCCCTGCC GGCGCGGCCC GAGCCGCTTG CCGCCCCCGA TGCGGCACTG
GCGCAGGCGC TGTTCGGCGC GGACGGGCCG GTGGTGCTGG ACCGCCGCGA AACGCCGGTG
CCGGGCTGGG GGGTCAGCCG CGACGGCCGG ATGCTGGGCG TGATCGGCTC GACCTGGGAG
ATCGCGGCGA CCACCGGCTA TTCCGGCAAG CCGCTGGACG TGCTGGTCGC GGTCACGCCG
CAGGGCGTGA TCGCCGGCGC CAGACTGGTG CGCCAGACCG AGCCGGTGCT GAGCCTTGGC
ATTTCCGAAG CGCATATCGC CGCCTATGTG GACGGGTTTC GCGGCGTCGA TCTGTCGCAG
GGCGAAGGGC AGGGACGGGC GCTGCCCGAC GTGATCTCGC GCGCCACGGT TTCGACCGGG
GTGATCCGCG ACGGCATCCT GCGCAGCGCC CGGGTGCTGG CGCAGGCGCA GGGGCTGGGT
GGCGGCGGCA TCGACCGGGT CGGCTATCGC CCCGCGACAT GGGCCGATCT GCTGGCCGAG
GGGGCATTCG GCCATGCGCT GGTCTCGATG GCCGATGCGG CGCGCGCCTT CGCGGGTGCC
AAGGTGCCGG TCGAGCCTTC GGACGCGCCG TTCCTGGACC TTTACGCCGG GCTGATCGAC
CCGCCGACCG TCGGCCGCAA CCTGTTGGGC GCGCAGGACT TCACCGCCGC GGCAGGCGCG
CTGCAACCCG GTCAGGCGCT GGTCGCGGTG CTGTCGCGCG GCCTTTACAG CCCGCGCGGC
ACGGAATGGC GCCGCTCGGG CCGGTTCGAG CGCATCGCCT TTGAACAGGG CGCGTTGCGG
ATCGAACCGG ACGACGGCGA TTTCGTCATG GTCGAGAAGC TTGCCCTGCC CGATGCGCCG
GCCTTCAAGG AAATCAGCCT GTTTCGGCTG AACATCGACC CCCTGGCCGG CGGCATCGAC
CCGCGCCGGC CCTTCGACCT GGTGGTGACC GCGACCCGGC CGCTTGCCGC GGGGGACGAG
GCCGCGCTGC CCATCCGCGC CACCATCCGC CTGCCCGAAG CCTATGCCGT CGCCGAGGCC
CCCGCCGTTC CGCTGTGGCA GGAGTTCTGG CTGAAGAAGA TCCCCGGCAT CGCCGTGGTC
GCGGCCATGC TGTTCGTGCT GGCGCTGATC CTGTTCGGGC AAGAGGCGCT GGTGCGCCGG
CCGATGCTGT GGCGGCGGGT GCGGCTGGGC TTTCTGGCCA CGACGCTGGT GGTGCTGGGC
TGGGGGCTGA ACGGCCAGCT TTCGGTGGTG CAGGTGGTGG CCTTCCTGAA CGCGCTGTTG
TCCGGCTTTC GCTGGGAGAC GTTCCTGATC GAGCCGATCA TCTTCCTGAT CTGGTCCGCC
GTCGCCTTGG GCCTGCTGTT CTGGGGCCGC GGCGTGTTCT GCGGCTGGCT GTGCCCCTTT
GGCGCGCTGC AAGAGCTGGC CAATGCCGCT GCGCAGCGGC TGGGGGTGCG GCAGATCGCC
GTGCCGCAGG CCCTGCACGA ACGGCTCTGG GTGATCAAGT ACACGCTTTT CGTCGCCATC
GTCGCGCTCA GCTTCTACAG CATGGAGCAG GCGCTGATCC TGGCCGAGGT CGAGCCGTTC
AAGACGGTGA TCTCGATGCG CTTCCTGCGC GCCTGGCCCT TCGTGCTGTT CGCCTTGGCG
GTGCTGGCGG GCGGATTGTT CATCGAGCGG TTCTATTGCC GCTACCTGTG CCCTCTGGGG
GCGGGGCTGG CGATCCCGGC CAAGCTGAAG ATCTTCGACT GGCTGCGCCG CCGCCCGCAA
TGCGGCCGCG AATGCCGGCT GTGCGAGACG AAATGCACTG TCGGCGCCAT CGACCCCCTG
GGCCGGATCA ATCCCAACGA ATGCGTGCTG TGCCTGCGCT GCCAGGTGGT GATGAACGAC
CCCGGCACCT GCCCGGTGCT GAAGCGCCGC GCCCGCAGCG CCGCCCCGAC CGGAGATGCG
CCATGA
 
Protein sequence
MAMPGKSSHA PSRLLLALLT LILLALPARP EPLAAPDAAL AQALFGADGP VVLDRRETPV 
PGWGVSRDGR MLGVIGSTWE IAATTGYSGK PLDVLVAVTP QGVIAGARLV RQTEPVLSLG
ISEAHIAAYV DGFRGVDLSQ GEGQGRALPD VISRATVSTG VIRDGILRSA RVLAQAQGLG
GGGIDRVGYR PATWADLLAE GAFGHALVSM ADAARAFAGA KVPVEPSDAP FLDLYAGLID
PPTVGRNLLG AQDFTAAAGA LQPGQALVAV LSRGLYSPRG TEWRRSGRFE RIAFEQGALR
IEPDDGDFVM VEKLALPDAP AFKEISLFRL NIDPLAGGID PRRPFDLVVT ATRPLAAGDE
AALPIRATIR LPEAYAVAEA PAVPLWQEFW LKKIPGIAVV AAMLFVLALI LFGQEALVRR
PMLWRRVRLG FLATTLVVLG WGLNGQLSVV QVVAFLNALL SGFRWETFLI EPIIFLIWSA
VALGLLFWGR GVFCGWLCPF GALQELANAA AQRLGVRQIA VPQALHERLW VIKYTLFVAI
VALSFYSMEQ ALILAEVEPF KTVISMRFLR AWPFVLFALA VLAGGLFIER FYCRYLCPLG
AGLAIPAKLK IFDWLRRRPQ CGRECRLCET KCTVGAIDPL GRINPNECVL CLRCQVVMND
PGTCPVLKRR ARSAAPTGDA P