Gene Pden_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2477 
Symbol 
ID4580115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2493386 
End bp2494507 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content73% 
IMG OID639769806 
ProductN-acetylglucosamine-6-phosphate deacetylase 
Protein accessionYP_916260 
Protein GI119385204 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1820] N-acetylglucosamine-6-phosphate deacetylase 
TIGRFAM ID[TIGR00221] N-acetylglucosamine-6-phosphate deacetylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.813045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.423668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG TTCTGACCGG CGCGCGGATC TTTGACGGCG CGCGTTTCCT CGACGGCCAT 
GCGCTGGTGA TCGAGGCGGG CGAGATCGCC GCGATCCTGC CCGAGGCCGA GGCCCCGGCC
AAGGGGCGGC GGGCGGTGCC GGGCATCCTG GCCCCGGCCT TTCTGGACTT GCAGGTGAAT
GGCGGCGGAG GGCTGATGCT GGACGGCACG ACCGATCTGG ACGGTCTGCG CCGCATCTGC
GCCGCGCATC GCGCGCTTGG CACGGCGGGC GTGCTGCCGA CGCTGATCAC CGACACGCCA
AAAGCCACCG CCCATGTCAT CGCACTGGGG ATCGCGGCGG CCGAGGCGCA GGTGCCGGGC
TTTCTGGGCC TGCACCTTGA GGGGCCGCAT CTGGACCCGC GTCGCAAGGG CGCACATGAC
CCGGCGCTGA TCCGGCCGAT GACCGACGAG GATCTGGCCC GGCTTTGCGA CGCCGCCCGC
CGGCTGCCGG CGCTGATGGT AACGCTGGCG CCTGAAGCGG CGAGCCCGCA GCAGATCGCC
GCCCTTGCCG GGGCGGGCGC CGTGGTCAGC CTGGGCCACA GCGATTGCAG CCATGACGAG
GCGCAGGCCG CCTTTGCCGC CGGCGCCCGC TGCGCCACGC ATCTTTTCAA TGCCATGAGC
CAGATCGGCA ACCGCGCGCC GGGGCTGGCC GGGGCGGTGC TGGCCGGCAA GCCGAGCGCC
GGGCTGATCG CCGACGGCAT CCATGTGCAT CCGGCGGTGA TGCGGCTGGC GCTGGGCGCG
CGGCCCGAGG GCATCTTCCT GGTCACCGAT TGCATGGCCT TTGCCGGCAC CGACCTGACC
GAGATGGAAC TGGGCGGCCG CAAGGTTCTG CGCCGCGACG GGCGGTTGAC GCTGGCCGAC
GGCACCTTGG CCGGGGCCGA CCTGACCCTG CCGCAGGCCA TCGCCGTGCT GGTCCGTCAG
GTCGGCATCG CGCCCGAACG CGCGCTGCGC ATGGCCTCGG CCATCCCCGC GGCATTGCTG
GGCTTGCAGG ACCGATATGG CACGCTGGCC CCCGGCCGTC CCGCCGACCT GGTGCTGCTG
GACGAGGACT TCGCCCTGCG CGGGCATCGG CTTTCGCCCT GA
 
Protein sequence
MAEVLTGARI FDGARFLDGH ALVIEAGEIA AILPEAEAPA KGRRAVPGIL APAFLDLQVN 
GGGGLMLDGT TDLDGLRRIC AAHRALGTAG VLPTLITDTP KATAHVIALG IAAAEAQVPG
FLGLHLEGPH LDPRRKGAHD PALIRPMTDE DLARLCDAAR RLPALMVTLA PEAASPQQIA
ALAGAGAVVS LGHSDCSHDE AQAAFAAGAR CATHLFNAMS QIGNRAPGLA GAVLAGKPSA
GLIADGIHVH PAVMRLALGA RPEGIFLVTD CMAFAGTDLT EMELGGRKVL RRDGRLTLAD
GTLAGADLTL PQAIAVLVRQ VGIAPERALR MASAIPAALL GLQDRYGTLA PGRPADLVLL
DEDFALRGHR LSP