| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2475 |
|---|
| Symbol | |
|---|
| ID | 4580113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2491594 |
|---|
| End bp | 2492361 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639769804 |
|---|
| Product | UbiC transcription regulator-associated domain-containing protein |
|---|
| Protein accession | YP_916258 |
|---|
| Protein GI | 119385202 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.505105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.226466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGC TTTTCACACC CGAGGCTTTC GAGGAAACCG GCGGCGGACC GCTTTACCTG
CAACTGCACC GGCTGATCGC CGAGGCCATC GCCTCGGGGC GGCTGCAACC CGGCGACAGC
CTGCCGTCCG AGCGCGAACT GGCGGCGATG ACCGGCCTGT CGCGCGTCAC CGTGCGCAAG
GGGGTGGCGG AACTGGTCGC CTCGGGGCAG CTGGTGCAAA AGCGCGGCTC GGGCACCTTC
GTCGCGCCCC GGGTCGAAAA GCTGGAACAG GCGCTGTCGC TGCTGACCTC GTTCACCGAG
GACATGGCCC GGCGCGGCCG CAGTGTCGAA AGCCGCTGGA TCGCCCGCGG CCTGCACGCC
CCCGCCCCGG AAGAGGTGAT GGCGCTGGGG CTGGGCGTCG GCGAAAAGGT GGCGCGGCTG
GAACGGGTGC GCAGTTCGGA CGGGGTGCCG TTGGCCATCG AGCGCGCCTC GCTGTCGCAG
GCCATCCTGC CCGATCCCGA TTGTGTCACC GATTCGCTTT ATGCGGTGCT GCAAGACCGC
GGGCTGCGGC CGGTGCGGGC GGTGCAGCGC ATTTCGGCCG CGAACCTGAA CGCCAAGGAC
GCCGAGCTTC TGGGCGTCCC CCCCGGCGTG GCCGGGCTGC GGATCGAACG CATCTCCTAC
CTGCCCTCGG GCAAGGTGGT CGAGTTCACC CGCTCGCTCT ATCGCGGCGA TGCCTACGAC
TTCGCCGTGG AACTGAAACT TGCCCCGGAA GGCGAAAGGA ACCCGTGA
|
|---|
| Protein sequence | MGELFTPEAF EETGGGPLYL QLHRLIAEAI ASGRLQPGDS LPSERELAAM TGLSRVTVRK
GVAELVASGQ LVQKRGSGTF VAPRVEKLEQ ALSLLTSFTE DMARRGRSVE SRWIARGLHA
PAPEEVMALG LGVGEKVARL ERVRSSDGVP LAIERASLSQ AILPDPDCVT DSLYAVLQDR
GLRPVRAVQR ISAANLNAKD AELLGVPPGV AGLRIERISY LPSGKVVEFT RSLYRGDAYD
FAVELKLAPE GERNP
|
|---|
| |