| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2465 |
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| Symbol | |
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| ID | 4580798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2480963 |
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| End bp | 2482648 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639769794 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_916248 |
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| Protein GI | 119385192 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.798132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.386301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTATTA TTCCAGGGAC GAACGGCAAC GACATCCTTA ACGGAACACC CCAGGACGAC
GAATTCCACA GGGGCAATGG CTTTGATCTG GTCTATGGCA ACGACGGCAA CGACCTGATG
AACGGCTCTG ACGTCGACAT GGGGGCGGAC ACGCTCTATG GCGGAGGGGG CAGCGATACC
ATCACAGGCT CGATAGGCGG TGATTCCATC GACGGGGGCG ATGGCGACGA CTACCTTTAC
GGTGCAAGAA TAGACAGCAC GCCTGACGGC AATGACACCA TCTTTGGTGG CGCCGGCGAC
GATTATATTC AAGGCATGAT GGGCTCCGAC CTGCTATATG GCGGTACTGG AAATGATCGC
ATCGTCGGGG ATGGCGGCGG GGCCACTGCC GGTCATGCTG ACACGATTTA CGGCGACGAA
GGAAACGACC GGATCTGGGC TGGGGGTGGC GGTGATCTCG TCTATGGCGG TGATGATAAC
GACTTGGTCT ACGGCGATGC CGGAAACGAT ACGCTTCACG GCGATGCCGG AAACGATACG
CTTGCAGGCG GTGCCGACCA TGACCTGATC TATGGCGGTA CCGGCGACGA TCTCCTTTTG
GGCGAAGCCG GGAACGATCT GGTTGACGGC GGTGCGGGGC ACGATTCCCT GCTTGGCGGC
GCCGGGAGCG ATACTCTGCT GGGCGGCGCG GGCAGGGACA CCTTGGACGG TGGTGCGGGC
GCCGATACGC TGACCGGCGG CCTGGATGCG GACGTGTTCA TCGCGGACGG CACGGCGGAC
ACGATCACCG ATTTCAACGC GACCGAGGGC ATCGGCGACG CGGACAGCAG CAACAACGAC
CTTGTCGACC TGTCCGCCTT TTACAACCAG ACCAGGCTGG CGGCGTGGAA TGCCGCCAAC
CCCGGCCTTC AGTTCAACAC CCCGCTTGAC TGGCTGCGCT ATGAACAATC GCAGGGTGCG
CTGGCCTCGG CCGGCGGGCT GCGTATCTTC AGCAGCTACG ACCCGGTGAC GAATGGCGGC
ACCTTCGTTT CGGCGGAACT GCTGAACGAG GAAAACACCA GGGTTCCCTG CTTTGCCAGG
GGCACGCGGA TCGCGGTGGC CGATGACGAG GTGGCGATCG AGACCCTGCG GGCCGGCGAT
CTGGTCCAGA CGCGGGACAA CGGCCTGCAA CCGATCCGCT GGATCGGCTC GCGCAAGCTG
AGCGCGGCAG AGCTGAAAGC CATGCCGAAC CTGCGGCCGA TCCGCATTGC CGCGGGCGCC
CTGGGCAAGG GCCTGCCGGT CGCCGATCTT CTGGTCTCGC CGCAGCACCG GGTCCTGGTG
CGCTCGAACA TCGCGCAGAA GATGTTCAAG ACGCGCGAGG TGCTGGTGGC GGCCAAGCAA
CTGGTGCTGC TGGAAGGGTT CGATATCGCG AACGACCTGC AAGAGGTGGA ATATTTCCAC
ATGCTGTTCG ACCGGCACGA GGTGGTGCTG TCGAACGGCG CCGAGACGGA ATCGCTTTAT
ACCGGCGCCG AGGCGTTGAA GGCCGTCGGC AAGGCGGCTG CCGAGGAAAT CTTTACGCTT
TTCCCGCAAC TGGCCGATCC CGACCATGTT CCGACCCCGG CCCGATACCT GCCGTCCGGT
CGCCAGGCCC GCAAGATGGG CATGCGCCAT CTGCAGAACA ACCGCCCGCT GATTGCTGCC
CAATAA
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| Protein sequence | MAIIPGTNGN DILNGTPQDD EFHRGNGFDL VYGNDGNDLM NGSDVDMGAD TLYGGGGSDT
ITGSIGGDSI DGGDGDDYLY GARIDSTPDG NDTIFGGAGD DYIQGMMGSD LLYGGTGNDR
IVGDGGGATA GHADTIYGDE GNDRIWAGGG GDLVYGGDDN DLVYGDAGND TLHGDAGNDT
LAGGADHDLI YGGTGDDLLL GEAGNDLVDG GAGHDSLLGG AGSDTLLGGA GRDTLDGGAG
ADTLTGGLDA DVFIADGTAD TITDFNATEG IGDADSSNND LVDLSAFYNQ TRLAAWNAAN
PGLQFNTPLD WLRYEQSQGA LASAGGLRIF SSYDPVTNGG TFVSAELLNE ENTRVPCFAR
GTRIAVADDE VAIETLRAGD LVQTRDNGLQ PIRWIGSRKL SAAELKAMPN LRPIRIAAGA
LGKGLPVADL LVSPQHRVLV RSNIAQKMFK TREVLVAAKQ LVLLEGFDIA NDLQEVEYFH
MLFDRHEVVL SNGAETESLY TGAEALKAVG KAAAEEIFTL FPQLADPDHV PTPARYLPSG
RQARKMGMRH LQNNRPLIAA Q
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