Gene Pden_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2464 
Symbol 
ID4580797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2480226 
End bp2480945 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID639769793 
Producthypothetical protein 
Protein accessionYP_916247 
Protein GI119385191 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.541836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.558522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA GTATTGCTAT TTCGACGAGC GTTCTGCTGG CCGCGGTTCC GGCATTTGGC 
GGCGGCTTCA CCATTCCCGT GGTCGAGACT CCGGTCGTCA TGCCGCAAGA GGTCGCGCCC
GCCATCGGGA GCTGGGAGGG GCTGTATCTG GGCGGTGCCC TCGGATCCGC TTTCGGCTCG
GATGACCGGG TCGGCATCTC GCAGCCGGGC GGCGGCGCGG CCTATACGCC GGGTTCGGTC
GATATCCGGG GCGCGACCTT TTCCCTTCAG ATGGGCTATC GATGGCAGCG CGAGGTTCGC
GGCCGGCAGA TCGTGACCGG CCCCGAACTG GCCTATGAGG CCGGCGGCGC GGATGACAGC
TTTTCGCGGG CGGGCGAATC CGCGTCGAGC GAGCTGAACG GTCTCTTGTC GCTGCGCTGG
AAGACCGGCG TGCTGAACGA AGCCGAGGAC CTGCTGTTCT ACGGGTCCGT CGGCATTGCG
CACGGCTCGT TCGACTACAC GGTGACCGGC GCCGGCATGC GTTACGACGG CGATTTCACC
GACAGCGCCC TGACCGTCGG GCTGGGCGTC GAGAAGAGGC TGAACGAGCG GGCGTCGCTG
TTCGGGGAAT GGGAGTTCCG GCAGTTCGGC AAGACGACCC TGACCGATGC GGCCGGTTAC
ACGACCCGGG CGACGCCCGA GCATCACAGC ATCCGCGTCG GTGTGAACTT CGCTTTCTGA
 
Protein sequence
MFKSIAISTS VLLAAVPAFG GGFTIPVVET PVVMPQEVAP AIGSWEGLYL GGALGSAFGS 
DDRVGISQPG GGAAYTPGSV DIRGATFSLQ MGYRWQREVR GRQIVTGPEL AYEAGGADDS
FSRAGESASS ELNGLLSLRW KTGVLNEAED LLFYGSVGIA HGSFDYTVTG AGMRYDGDFT
DSALTVGLGV EKRLNERASL FGEWEFRQFG KTTLTDAAGY TTRATPEHHS IRVGVNFAF