Gene Pden_2451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2451 
Symbol 
ID4580784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2456858 
End bp2458192 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content73% 
IMG OID639769780 
Producthypothetical protein 
Protein accessionYP_916234 
Protein GI119385178 
COG category[S] Function unknown 
COG ID[COG3522] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03353] type VI secretion protein, VC_A0114 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0187575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG GCAGCCGCGT CTTCTGGTCC GAGGGCCTGT TCCTGCGCCC GCAGCATTTC 
CAGCAGCAGG ACCGCCATGC CGCGGCCCAG TTGCGCGCGC TGCTGCGGGC GCGGCCGCGG
CAGGCATGGG GCTTTGTCGC GCTGCGGCTG GACCCCTCGG CGCTGGAGGC CGGGCAGGTC
GCCATCGCCG AGGCCGAGGG GCTGTTCCCC GACGGCACCG CCTTTCGCAT CCCGGCCGAC
AGCCCGGCGC CGCCGCCGGT CGCGGTCGGC CGCGCGACGC CCGCCGGCGC GGTCCTTCTG
GGCGTGGCGC CGCGCCAGCC CGGCACGGCG GCGGTCGATC CCGCCCATGC CGAGCCGGGC
GGCGCGCGCT GGCGCGGTGA ATGGACCAGC CTGCGCGACG AGATCCGCGG CGGCACCGAG
CCCGCCGAGG TCGAGATCGC CCGGCTTTCG ACCCGGCTGT TCCTGCCCGG CGAGGCCACG
CAGGGCGCCG TCACCCTGCC CTTGGCCGGG ATCGAGGGGC TGGCCGCCGA CGGCCGGGTC
GCCTTGGCCG AGGGCTGGCT GCCCCCCGCG CTGACGCTGG CCGCCGTGCC CTGGTATGCC
GGGCTGCTCA AGGAACTGGT CACCGGGCTG GACCGCATCA TCGAGGCGCA GGGCGGCATG
GTGCTGGGCG GCGGCGGCCG CTCGGTCGAG AACCTGCTGA TCCTGGAGCT GGCCAACGCC
GCCCGGCCAA GGCTGCAACA CCTGCTCGCG CAGAACCTTG CGCACCCGTC CGAGCTTTTC
GCCGACCTGG CCGAGCTGGC GGGGCGGATG GCGACCTATG GTTCCTCGAC CCGGCGGCTG
TCGCCGCTGC CCGATTACGA TCATGCCGAC CCGCAGCCGG GTTTCGCCGC GCTGGCGGAT
GCGCTGCGCT CGCTGATCCT GTCCCTGCGT CATGTCGAGC CGAAATCCCG CGCCCTGCCG
GTCGCGCGTC ACGCGCAGAA CGTCTGGAAG GTGCGCATCG ACAATCCCGA GATCCTGCAG
AACAGCCGCA TCGTGCTGCG CATCGGCTCG GACATGTCTG ACGAGGGGCT GATGCAGCTT
TTCACCCGCC AGGTCACCGT GGGCGCGGCC GAGGAGTTCG AGACGCTGTG GACCTCGCGC
CTGCCGGGCA TTCCCCTGCG GCCGCTGCAT TCGCAGCCGC GCGAGATCCC CTATGACGGC
GACCGGCTGT GCCTGGAGCT GGACCGTAAG TCCGAGCACT GGGCACGGCT GCAAGCCTCG
CCGGGCTTCG TGCTGGGCGT GTCCGGCAAG CTGGACCGCG AACCCGAAAT CGACTGCTAC
GCGGTCAGCA GATAG
 
Protein sequence
MTEGSRVFWS EGLFLRPQHF QQQDRHAAAQ LRALLRARPR QAWGFVALRL DPSALEAGQV 
AIAEAEGLFP DGTAFRIPAD SPAPPPVAVG RATPAGAVLL GVAPRQPGTA AVDPAHAEPG
GARWRGEWTS LRDEIRGGTE PAEVEIARLS TRLFLPGEAT QGAVTLPLAG IEGLAADGRV
ALAEGWLPPA LTLAAVPWYA GLLKELVTGL DRIIEAQGGM VLGGGGRSVE NLLILELANA
ARPRLQHLLA QNLAHPSELF ADLAELAGRM ATYGSSTRRL SPLPDYDHAD PQPGFAALAD
ALRSLILSLR HVEPKSRALP VARHAQNVWK VRIDNPEILQ NSRIVLRIGS DMSDEGLMQL
FTRQVTVGAA EEFETLWTSR LPGIPLRPLH SQPREIPYDG DRLCLELDRK SEHWARLQAS
PGFVLGVSGK LDREPEIDCY AVSR