| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2449 |
|---|
| Symbol | |
|---|
| ID | 4580782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2455141 |
|---|
| End bp | 2456376 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639769778 |
|---|
| Product | FHA domain-containing protein |
|---|
| Protein accession | YP_916232 |
|---|
| Protein GI | 119385176 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
|---|
| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.01697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGC GCCTCACCAT CCTTGCAAGC CCCGTTCCCC AGCCCCAAAC CGAATTGCGG
CTGGACAGCG GCCGGGCGGA GCTGGGGCGC GAGCCGGGCT GCGACTGGCA GATCGACGAC
CCCGAGATGT TCGTCTCGCG CCGCCATTGC ATCGTCGAGG CCACGGCCGA GGGCTGGACC
GTCACCGATA CCAGCACCGG CGGGCTGTTC CTCGACGGGG CGGCCGAGCC GCTGGGACCG
GGCCGCAGCG CCGCGCTGCG CGACGGAATG CGGCTGCGGC TGGGCGACGT CACTCTGGGC
GTGACCGTCG AGACCGGGGC GCAGGCAGCG GCGGCACCCG ACCAAGGCAT CGGGATCGAC
CCGTTCTTCG CGCCCCGCGA TCCGGCACCG CCGCCGCCGC CGCGCCCGCT GGAACTGCCC
GAACCCTTCG AGCGCACGAC CGGCCGTTTC GCCCCGCAAC CGCCGCCCGC GCCGCCGCCG
GGCTTCGACG ATCCCTTCAT GCTGGACCCG CTGCCCGCCG CACCGCCTGC AACGCCGCCC
CAGGCGGGCG ACGATTGGAG CTGGGGACCG GCGGGCGCAT CGCCGCCCCG GCCCGAACCC
GTGCCTGTCA TGTCAGCCGC TCTGCCGGAT TCCCCTCCCC CTGCCGCCCC GCAACCGCAG
CCGCCATCCG ACGCGGCCGC CGCCTTCCTG CGCGGCGCCG GGCTGGACCC GGCAAGTGTC
GAAGGTGTCG ACATCGAGGC GCTTGGCCGC CGCTACCGGA TGCTGGCCGA GGGGCTGGTC
GCATTGCTGC GCGCGCGGGC CGAGGAAAAG GGCTCGTTGC GCGTCGCCCG CACCACGCTG
GGCGCGGCAC AGGTCAACCC GTTGAAATTC CTTGCCATGC CCGACGAACA GGTGGCCGCG
CTGATCGCGC CGCGCGGGTC GGGCTATCTG GACCCCGACG ACGCCATCGC CGAGGCGTTC
CGCGACCTTG CCGACCACCG GATGCGCAGC TGGCACGGCT TGCAGGCCGC GCTGCGCCGC
ATGATCGACC GCTTCTCGCC CGAGGCGATC GAGGCGCAGC TGGCCGATGC CGGGCTGCTG
CGGGCGCTGC TGGCGGGCGG GCGCTCGGCG CTGCTTTGGG ACGCCTATGC CGCCCGCTGG
GCCGAGATCG CCCGCGCCGC CGAGGACCGC TTCCTGGGCG AGGTCGGCGC CGAATTCCGC
GATGCCTACG AAACCCCTGA CAGGAGCGAG CCATGA
|
|---|
| Protein sequence | MTLRLTILAS PVPQPQTELR LDSGRAELGR EPGCDWQIDD PEMFVSRRHC IVEATAEGWT
VTDTSTGGLF LDGAAEPLGP GRSAALRDGM RLRLGDVTLG VTVETGAQAA AAPDQGIGID
PFFAPRDPAP PPPPRPLELP EPFERTTGRF APQPPPAPPP GFDDPFMLDP LPAAPPATPP
QAGDDWSWGP AGASPPRPEP VPVMSAALPD SPPPAAPQPQ PPSDAAAAFL RGAGLDPASV
EGVDIEALGR RYRMLAEGLV ALLRARAEEK GSLRVARTTL GAAQVNPLKF LAMPDEQVAA
LIAPRGSGYL DPDDAIAEAF RDLADHRMRS WHGLQAALRR MIDRFSPEAI EAQLADAGLL
RALLAGGRSA LLWDAYAARW AEIARAAEDR FLGEVGAEFR DAYETPDRSE P
|
|---|
| |