| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2447 |
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| Symbol | |
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| ID | 4580780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2452278 |
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| End bp | 2454140 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639769776 |
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| Product | hypothetical protein |
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| Protein accession | YP_916230 |
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| Protein GI | 119385174 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00953014 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.864347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCG CCTTCCTTGC CGCCTACGAG GCCGAACTGG ACCATATCCG GGTGCTGGCC
GGCGAATTCG CCGCCCTGCA TCCCAACGTG GCGCGCAACC TGTCGCTGGA CGCCGTGCCC
TGCCCCGACC CCTATGTCGA GCGGCTGCTG GAGGGCGTGG CCTTCCTGGC CGCCCGCACG
CGGATGAAGG TCGAGGCCGA GGGCCAGCGT CTCACCGCCG GGGTGATGGA CGCGCTTTGG
CCCGACCTGG CCGCGCCGGG GCCGGCCATG GGCATCGGCG TGCTGCAACC CGGCCCGCAG
GTGCAGGCCA TGGCGGGCGG GCATCCGGTG CCGCGCGGCA GCCGCTTCAC CGCCGCCGTG
CGCGAAGGGC TGGCCACCCG CGCCACCTAT GCCACCGCGC AGGCGGTGAC GCTCTGGCCG
CTGGCGCTGG GGACGGCGGA CTACCTGCCC GACCTTGGCG CGCTGGCCGC CGCGGGCCTT
GCCGCGCCGG GGGCCGAGGC GGGCATCCGC ATCGGCCTGC ACGCGACGGG ACCGACCGCG
CTGTCGGCGC TGGCGCTGGA CCGGCTCGAC CTGTGCTTTG CCGGCAGCGC GCGGGCGGGG
GCGCTGTTCG ACGCGATCTT CGGCGGCGGC CTCGGGGCGC TGGCGCGGCC CGCCCGGCCG
GGGGCGGTCG CGCTTCCCCT CGCCCGGCCC GACCTGGTGG GCACCGGCGA CGACGAGGGG
CTGACCCCGC GCCTGCGCCG CAGCTTCGAG GGCTTCCGGC TGCTGCGCGA CTATTTCCTG
ATGCCGGAAC GCTTTCACTA CCTGCGGCTG GACGGGCTCG CGCCCGCCGC CCGGCAATGC
GGCGAAGGCG TGACGCTGGA GCTTGCCCTG CCGCTTGCCC GCCCCCAGCC GCTGCTGGAG
GGGCTGGGCC GGGACGATTT CCGGCTGTTC GCCACGCCGC TGGTCAACCT GTTCGAGAAA
GAGTGCAATT TCGTCGAACT CGATCCGCGG GCCACGGCGC ATCCGGTCCA TCCCGACCGC
GCCCGCACCC GCGATTTCGA GGTCTATCGC CTGATCCGCG TCGCCGATGC CGACCGCGAG
GGGCAGGACG GGCTGCTCTG TCCCGCCCAT GCCCCCGAGG CGCCGCGCCA TGCCGGCCCG
GTCTGGTGGA CCGAGCGCCG CCCCCGCCGC CCGGCCACCG ACGAGATCCG GCGCGGCCAG
ATGCGCAGCT CCCATGCCGG GCACGACCTG TGGATCTCGG TCTCGCGCGC GGACGGGCGG
ATGCCGCACC GGCTGGACAT CCGCGCGCTT TGCACCAATC GCGACCTGCC GATCCTGGAC
GACACGCCGC GGTTGACCCC CGAGGGCGGC GAGCCGGTGA TGCGGGTCGA TCTGTTGGGC
CCGATGCGCC GACCCCAGCC AGCACTGGCA GGCGCGCCGC CGCAGGCGGG CCAGGGCGGC
ACCGCGGGCC TGGACGACCT GACCTGGCGG TTGGTGGCGC AGCTTGCCTC GGGCCATCTG
TCGCTGGCCG AGGCCGGGCG CGACGGCGCA CCGCTTTGCG CGCTGCTGGC GCTTTACGCC
GATCGCGGCG ATCCGCGGCT TGCCCGCCAC GCCCGCGCCG TCGCCGCAGT ATCGAGCCGC
CCGGTGATCG AGCGGCTGGA GCTGCCCGGC CCGCTGGCCC TCGGCCGCGG CACCGAGATC
ACGCTGGAGA TCGACGAGGC CCCGCTGGCC GGGGCCAGCC GGCTGCTCTT GCCGGCGCTG
CTCGACCGGC TGTTCGCCCG GCACGCCTCG GTCAACGCCT TCGTGCGCAC CCGCACCCGC
CTTGTCCAGA AACAGGAGGA GATGTCATGG CCGATGCGGC CCGGCCTGCG CGCCCGGATC
TGA
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| Protein sequence | MDRAFLAAYE AELDHIRVLA GEFAALHPNV ARNLSLDAVP CPDPYVERLL EGVAFLAART
RMKVEAEGQR LTAGVMDALW PDLAAPGPAM GIGVLQPGPQ VQAMAGGHPV PRGSRFTAAV
REGLATRATY ATAQAVTLWP LALGTADYLP DLGALAAAGL AAPGAEAGIR IGLHATGPTA
LSALALDRLD LCFAGSARAG ALFDAIFGGG LGALARPARP GAVALPLARP DLVGTGDDEG
LTPRLRRSFE GFRLLRDYFL MPERFHYLRL DGLAPAARQC GEGVTLELAL PLARPQPLLE
GLGRDDFRLF ATPLVNLFEK ECNFVELDPR ATAHPVHPDR ARTRDFEVYR LIRVADADRE
GQDGLLCPAH APEAPRHAGP VWWTERRPRR PATDEIRRGQ MRSSHAGHDL WISVSRADGR
MPHRLDIRAL CTNRDLPILD DTPRLTPEGG EPVMRVDLLG PMRRPQPALA GAPPQAGQGG
TAGLDDLTWR LVAQLASGHL SLAEAGRDGA PLCALLALYA DRGDPRLARH ARAVAAVSSR
PVIERLELPG PLALGRGTEI TLEIDEAPLA GASRLLLPAL LDRLFARHAS VNAFVRTRTR
LVQKQEEMSW PMRPGLRARI
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