| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2442 |
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| Symbol | |
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| ID | 4580775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2447625 |
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| End bp | 2448755 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639769771 |
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| Product | ImpA domain-containing protein |
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| Protein accession | YP_916225 |
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| Protein GI | 119385169 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.405582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTCG CCCCGCTTTC CGTGCCGGAT TCCGCCGGAT CGGATCTTCG CAACGACATG
AGATTTCTGG CTCTCGCGCG GGCGCTGGAC GGGGCCTCTC GGGCGACCCG GGCCGAGCAG
CTGGCCAAGG GCAATACCGG CGACGTGGCG CTGGACTGGG CGCATCTGCT GGACGAGGCC
GAGGCGCTGG CCCAGACCGG CCGCGACCTG CGCCTGCTGG TCATCGTGGC ACGGATCATG
ACCAACATGC GCGGCCCCGA GGGACTGGCC GAGGGGCTGG ACCTGCTGGC CGGCACGCTG
GAGACTTGGT GGGACCACCT GCACCCCGCC TTGCGGGAAG GCCAGCTTGT GCGCGAAGCC
GCGCTGCGCC GCATCAACGC GCTTTACCAG ATCGAGAATG CCGATGCGGG GATCCTGGGC
GATCTGGAGT TCAATACCAT GCTTGCCCCG CGCGGCCTGC CGGTGGTCTC GGGCGGGGAT
CTGGCGGCGG GCACGGTCAC GCCCTCGGTC CTGGCCGCCG AGGGGCCGAC CGGCCTTTCC
GCCGCCGAAC AGGCCGAGCG CGCGGCGCTT CATGACGCAA GGGTGACGCG GGTGCTGACC
GCCTGCCGCG CCTCGCGCGA CATGGAGCCC GAGGCGGTGG CGGGGCTGGA GGCAGGGCTT
GCCGCCTCGC TGGAGGCGCT CGCCCGGCTG GAAACGGCCC TGGCCGCCCG CATCGGGGAC
GACCCGCCGA CCCGCTTTCC GGCGCTGCGG CGGCTGCTGG AGCGGATGGC GGCGACGCTG
GCCAGCCCGC AGGCCCAGTT CAGCCATGCC GCGCAGCCGG CGGCGCAGGC GGAAACCGAC
GCACCCGCGG CGCCCCCCGC CCCGATGCCC GCACCTGCGG CCGTTCCCTT CGCGTCCGTA
TCAGCGGGCC TGCCGGCAAG GCTGGCCACA CGCGCCGAGG TCGAGACCTG TCTCGACCTC
ATCATCGATT TCTACGACCG CAACGAACCT GCCTCGCCGC TGCCGCATCT GGCGCGGCGG
ATGAAGAAGA TGGTGCCGAT GAACTTCCTG CAACTGATGG AGGAACTGGC GCCTGGAGGA
ATGAAGGAAT TCCGCAATGT CGCCGGAGTG GCCGAGGACA AGGGACGCTG A
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| Protein sequence | MFLAPLSVPD SAGSDLRNDM RFLALARALD GASRATRAEQ LAKGNTGDVA LDWAHLLDEA
EALAQTGRDL RLLVIVARIM TNMRGPEGLA EGLDLLAGTL ETWWDHLHPA LREGQLVREA
ALRRINALYQ IENADAGILG DLEFNTMLAP RGLPVVSGGD LAAGTVTPSV LAAEGPTGLS
AAEQAERAAL HDARVTRVLT ACRASRDMEP EAVAGLEAGL AASLEALARL ETALAARIGD
DPPTRFPALR RLLERMAATL ASPQAQFSHA AQPAAQAETD APAAPPAPMP APAAVPFASV
SAGLPARLAT RAEVETCLDL IIDFYDRNEP ASPLPHLARR MKKMVPMNFL QLMEELAPGG
MKEFRNVAGV AEDKGR
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