| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2440 |
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| Symbol | |
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| ID | 4580773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2442469 |
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| End bp | 2445216 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639769769 |
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| Product | ATPase |
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| Protein accession | YP_916223 |
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| Protein GI | 119385167 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.217736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.396011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG TGACGCCCCG CGCCCCCGCC AGAGGTTCCA GAGAGACGGT CAAGCGCAAG
GAGCTGGTCG GCCGGCTGGA CCCGCTGTGC CTGCGGGCGT TTTCCGACGG CGCGCGCAAC
GCCAAGGCGC GCGGCAATCC TTATGTCGAG CTGGTGCATT TCATTGCCGC GCTGGCCGGG
ATGCCGGATT CGGACCTGTC GCTGATCGCC GCGGCGGCCG GGGTCGACGC CGCCCGGCTG
GAGGGCGACC TGGCCCGGGC GCTGGACGCC CTGCCGCGTG GCGCCAGCGC GGTCGAGGAG
TTTTCCGACC ACATCTTTCA CGCCATCCAG GAGGGCTGGA CCCTGGCCGC GCTGGAGGGC
GGCACCGATC GGGTGCGTTC GGGCGACATC CTGGTCGCCT GCCTCAAGAC CCCGGTGCTG
GAGGGGTTGC TGCTGCGCAT CAGCCCGGAG TTCGGCCGCA TCGACCCCGA CCGCATGGCG
CCGGACCTGC CCGGCATCCT GGCCGGCTCG GCCGAGGCGG AGGGGACGGC CCCGCCCGAG
ATGGCGCCGG CCAACGTGCC GAAACCGCCC GAGGGGGCGC TGGCGAAATA CGCCACCAAC
CTGACCGAGC GGGCGCGGGC CGGCAAGATC GACCCGGTGG TCGGCCGCGA CCCGGAAATC
CGCCAGATCA TCGACATCCT GATGCGGCGG CGGCAGAACA ACCCGATCCT GACCGGCGAG
GCAGGGGTGG GCAAGACCGC CGTGGTCGAG GGCTTTGCCC TGCGGCTGGC GCGCGGCGAC
GTGCCGCCGC AACTGGCCGC GGTCGATCTG TGGCTGCTGG ACATCGGGCT GATGCAGGCC
GGCGCCAGCG TCAAGGGCGA GTTCGAAAAG CGGCTGAAAT CGGTGATCGA CGAGGTGCAG
GCTTCGGTGA AATCGGTGAT CCTGTTCATC GACGAGGCGC ATACGCTGAT CGGTGCCGGC
GGCGCGGCGG GAACGGGCGA TGCCGCGAAC CTGCTGAAAC CCGCGCTGGC GCGGGGCGAG
TTGCGCACCG TCGCCGCCAC CACCTGGGCC GAATACAAGC AGCATATCGA AAAGGATCCG
GCGCTGACCC GGCGCTTTCA GGTGGTGAAG GTCGAGGAGC CATCGGAGGC GGCCGCCGTC
GAGATGCTGC GCGGCGTGGC GGGCGTGCTG GAAAAGCACC ACCGGGTCGA GATCCTGGAC
GAGGCGATCG GGGCCGCGGT TTCGCTGTCG CATCGCTATA TCCCGGCGCG GCAATTGCCG
GACAAGGCGA TCAGCCTTCT CGACACCGCC TGCGCCCGCG TCGCCGTCAG CCAGCACGCC
ACGCCCGCCG AGTTGGAGGA TCTGGAGCGT CGCCTGCAGG CGCTGGAGAT CGAGGCGGGC
ATCATCGCCC GCGAGGCCGC CATCGGGATC GACACGACCG AGCGCCAGGC CGCCAACGAC
GCCGCCCGCA CCGCGACGGA GGCCGAGCGC GCGGCCGCGC TGGAACGCTG GGAGGCGGAA
AAGGCGCTGG TCTCGGACAT CCTGACCTTG CGGGCCGAGT TGCGCGGCGA GGGCATGGCA
CTGGACGAGA CGGGGGCGAA CGAGGCGGGG GCGGATACGG ACGGCGCTGA TAGGTTGCCC
CCAGCCTCTG CGGAAACCGA GGCGGCCGAC CCCCCCGACA CCGCCGCGCG GCTGGCACTT
TTGCGCACCA AGATGGCCGA ACTGGCCGAA AGGCAGGGTG AGCGGCCCTT GATCCTGCCC
TCGGTGGACC GGCTGGCGGT GGGGGCGGTG GTGCAGGACT GGACCGGCAT CCCGCTGGGC
CGGATGCTGG CCAGCCAGAC CGAGCGCGCG CTGGGCCTTG CGGGCCTGCT CGCGCAGCGC
GTCGTCGGTC AGGACCATGC CATGGCCACC ATCGCCAGCC GCATCCAGAC CGGCATGGCC
GGGCTGGGCG CGCCGGAAAA GCCGATGGGC GTCTTCATGC TCTGCGGTCC CTCGGGCGTC
GGCAAGACCG AGACCGCGCT GGCGCTGGCC GACGCGCTTT ACGGCGGCGA GCAGAACCTG
ATTTCCATCA ACATGAGCGA GTTCCAGGAG GCGCATACCG TCTCGACCCT CAAGGGCGCG
CCGCCGGGCT ATGTCGGCTA TGGCAAGGGC GGCGTGCTGA CCGAGGCGGT GCGGCGCCGG
CCCTATTCGG TGATCCTGCT CGACGAGGTG GAAAAGGCCC ATCCCGACGT GCACGAGATC
TTTTTCCAGG TCTTCGACAA GGGGATGATG GACGACAGCG AGGGGCGGCG GATCGACTTT
CGCAACACGC TGATCCTGAT GACCTCGAAT GTCGGCACCG ACGAGATCAT GGCGCTGACC
GATGCCGGCC GCACCCGGGT CGAGATCGAC AGCCTGTCGG CCGCGCTGCG CCCGCCCTTG
CTGAAGGTGT TTCCCCCGGC GCTGCTGGGG CGGCTGGTGA CGATTCCCTA CCTGCCGCTT
TCGGATGCGA TGATCGAGGC CATCGCCGGG CAGAAGCTGG CCGGCATCGG CCGCAGGCTG
GCCGCCGCGC ATGGCGCCGA ACTGGTGATC GGCGCGGGAG TCATGGAGCA GATCCGCGCC
CGCTGCACCG AGGTCGAATC GGGCGGCCGC ATGATCGACG CCATCCTGAC CGGCGCGATC
CTGCCCGAAC TCAGCCGCCG GGTGCTGGAT GCCAGGCTGG AAGGGCGCGG CATCGGCAGG
GTGACGGTGA CCGGCGGGCC GGACGGCTTC GGCTATGCGC TGGACTGA
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| Protein sequence | MTTVTPRAPA RGSRETVKRK ELVGRLDPLC LRAFSDGARN AKARGNPYVE LVHFIAALAG
MPDSDLSLIA AAAGVDAARL EGDLARALDA LPRGASAVEE FSDHIFHAIQ EGWTLAALEG
GTDRVRSGDI LVACLKTPVL EGLLLRISPE FGRIDPDRMA PDLPGILAGS AEAEGTAPPE
MAPANVPKPP EGALAKYATN LTERARAGKI DPVVGRDPEI RQIIDILMRR RQNNPILTGE
AGVGKTAVVE GFALRLARGD VPPQLAAVDL WLLDIGLMQA GASVKGEFEK RLKSVIDEVQ
ASVKSVILFI DEAHTLIGAG GAAGTGDAAN LLKPALARGE LRTVAATTWA EYKQHIEKDP
ALTRRFQVVK VEEPSEAAAV EMLRGVAGVL EKHHRVEILD EAIGAAVSLS HRYIPARQLP
DKAISLLDTA CARVAVSQHA TPAELEDLER RLQALEIEAG IIAREAAIGI DTTERQAAND
AARTATEAER AAALERWEAE KALVSDILTL RAELRGEGMA LDETGANEAG ADTDGADRLP
PASAETEAAD PPDTAARLAL LRTKMAELAE RQGERPLILP SVDRLAVGAV VQDWTGIPLG
RMLASQTERA LGLAGLLAQR VVGQDHAMAT IASRIQTGMA GLGAPEKPMG VFMLCGPSGV
GKTETALALA DALYGGEQNL ISINMSEFQE AHTVSTLKGA PPGYVGYGKG GVLTEAVRRR
PYSVILLDEV EKAHPDVHEI FFQVFDKGMM DDSEGRRIDF RNTLILMTSN VGTDEIMALT
DAGRTRVEID SLSAALRPPL LKVFPPALLG RLVTIPYLPL SDAMIEAIAG QKLAGIGRRL
AAAHGAELVI GAGVMEQIRA RCTEVESGGR MIDAILTGAI LPELSRRVLD ARLEGRGIGR
VTVTGGPDGF GYALD
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