Gene Pden_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2439 
Symbol 
ID4580772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2441360 
End bp2442460 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content71% 
IMG OID639769768 
Producthypothetical protein 
Protein accessionYP_916222 
Protein GI119385166 
COG category[S] Function unknown 
COG ID[COG5351] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.646599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.310656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGATTT TCGACCAGAC CGGCTTTCCC CATCAGATGG GGACCGGCAT GGACGTGGCC 
GGGCAAGGCT ACATGCTGCT GGTGGTCAAG GGCAGCTTCG CCTTTCCCGA CCGTGAAACC
GACCCGCCCC TGCCGCTGAA GGACCAGCGT CCGCTGGTCA TGGCCGACGA ATATACCGGC
GCGCCGGGCT TTTCCGCGCC GCTTTGGGAA AGCGATTTCG CCTTTCGCAA GCCCTTCTGC
GATGTGGTGC TGAACGGCGC CGCCCATGCA CCGGACGGCC GCCCGGTCGA GCGGCTGCGC
GTCGGGCTGG CGGTGGGCAA CTGGTCCAAG CAGCTCGACG TGGTCGGCCA GCGCGAATGG
CGCGTGCTGG GGCCGGCCAT CGCCGCGACC CGGCCCTATC CCTTCACGCG GATGCCGTTT
TCCTATGACA CGGCCTTCGG CGGTCCCGAC CGCAGCCGTC CACCCGGTCC CGACGTGCCG
GTCCATGCCG CCAATCCGGT CGGGCTGGGC TGGGCCACCG CCTCGGGCGG CAGTCCGGCC
GGGCTCGCGC TGCCCAATAC CGAGGCGCCG GGGCAGGAGA TCACCTCGCC CTATGGCGAC
TGGCAGCCGA TGGCGCTGGG GCCTTATGGG CGCGGCTGGC CGCTGCGCCT GCCCTATGGC
GGCACCTATG ACGAGCGCTG GGTGGCCGAG ACCGCGCCCT TCCTGCCGCG GGATTTCGAT
GAGCGCTACT ACCAGATGGC GCCGCCCGAC CAGCAGATCG CGCCGCCCGC GCCCTTTACC
CCGGTGGTGC TGGTGCATCT GACCCCGCGC GGGCGCGAGG CGTTCCGTCT GCCCGACACC
CGGCTGCCGT TCCGGGTCTG GCGCGGGCGC GAATGCTGCC TCGACACCGC GGCGCTGCCC
GACACGCTGG CCATCGATGC CGAGGCGCGG GTTTTCATGC TGAGCTGGCG CGTGCAGGTG
CCGATCCGCC GCACCATCGC CGAATTCTCG CGCGCATGGA TCGGATCGCC GACTGCCGCC
ATGCTGCGGG CCGAGCGCGA GGGGCGCGGC TATATCCGCC TGGCGGCCGT TCCGGGCGAG
GGCGAGGGGG ATGGCCCATG A
 
Protein sequence
MQIFDQTGFP HQMGTGMDVA GQGYMLLVVK GSFAFPDRET DPPLPLKDQR PLVMADEYTG 
APGFSAPLWE SDFAFRKPFC DVVLNGAAHA PDGRPVERLR VGLAVGNWSK QLDVVGQREW
RVLGPAIAAT RPYPFTRMPF SYDTAFGGPD RSRPPGPDVP VHAANPVGLG WATASGGSPA
GLALPNTEAP GQEITSPYGD WQPMALGPYG RGWPLRLPYG GTYDERWVAE TAPFLPRDFD
ERYYQMAPPD QQIAPPAPFT PVVLVHLTPR GREAFRLPDT RLPFRVWRGR ECCLDTAALP
DTLAIDAEAR VFMLSWRVQV PIRRTIAEFS RAWIGSPTAA MLRAEREGRG YIRLAAVPGE
GEGDGP