Gene Pden_2426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2426 
Symbol 
ID4580759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2429742 
End bp2431064 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content71% 
IMG OID639769755 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_916209 
Protein GI119385153 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.915417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGGC TGTCCCTGAT CGCCGCTCTG GCTGGCCTGA CCGCCCTTTC GGCCTGCACC 
CAACGCGAGG CGCCGCTGCC CGGAGAGCGG CTGGACCCGC GTGCCGTGCT GTCGCCCGAC
GGTCCTGCCA CCGAAGGCGC CCAGGCGCCC ACCACCGCCG CCCTGTCCCT GCCGCCTGTG
CGCGCCAATG CCGACTGGCC GCAGCGCGCC GGCAACGCCG CCCATGCGCC GGGCAACGTC
GCGCTTGGCG CCGGCACGCG CCGGCTCTGG GCGGTGCCCA TCGGCACGGC CTCGGACAAG
CGCCACCGCA TCACCGCCGA ACCCATCGTC GCGGCGGGGC TGGTCTTTGC CATGGACAGC
CAGTCCACCG TCACCGCCAC CACGGCCGGC GGCGGCCGGG TCTGGAGCGT CGATCTGCGC
CCGGCCGGCG AAAGCGGCCG CAGCGTCTCG GGCGGCGGGC TGGCCTTCGA GGGCAACCGT
ATCTTCGTCA CCACCGGCTA TGGCGAGCTG GTGGCGCTGG ATGCCCGCAC GGGCGCCGTC
GCCTGGCGGC AAAAGGTCGG CTCGACGATC GGCGGCGCGC CCACGGTCGT CAATGGCGTG
GTCTATGTGC TGGACCGCGA ACAGACCGGC TGGGCGGTGC GCGCCAATGA CGGCAAGGTG
ATGTGGCGCA GCTTCGGCAA CAAGGACATG GCCGGGGTGA TGGGCGCCTC GGCCCCGGCA
GTCTCGGGCA GCACGGTGGT CTTTCCATCG AACACCGGCG CGCTGGCGGG CGTGGATGCC
CGCGACGGCA GCCAGCTCTG GGTCGCCAAT GTCGGCGGAA CCCGGGTCGG CCGCGCGGTC
AGCTATTTCC GCGACATGAC CGGCGATCCG GTCATCCTGG GCAACACGCT TTATGCCGGC
ACCAGCGCCG GCGGCGTCGG CGCCTACGAC ATGAGCAACG GCATGATGAA ATGGCATGCC
CGCGAAGGCG CGGCAAGCCC GGTCCTGGCC GCCGGCAATT CGGTCTTCCT GGTGAACGAC
CAGGCGCAGC TGATCCGGCT GGACGCGGCG AACGGCGCCC GGGTCTGGGC GCAGAAGCTG
CCCTATTTCA CCGAGTCCGT CATCCGCAAG CAGGACCGGG TCTGGAACCA TCACGGGCCG
GTGCTGGCGG GATCCAAGCT TTACCTTGCC TCGTCGGACG GCTATCTGCG CGTCTTCGAT
CCCGCCTCGG GCGCGCTGAT CGGCACCGCC CAGATCCCGG GCGGCGCCGC GGCAGCCCCG
GCCGTCGCGG GCCAGACCCT TTACGTCGTC ACCCATGACG GCCAGTTGAT CGCATACAGA
TGA
 
Protein sequence
MTRLSLIAAL AGLTALSACT QREAPLPGER LDPRAVLSPD GPATEGAQAP TTAALSLPPV 
RANADWPQRA GNAAHAPGNV ALGAGTRRLW AVPIGTASDK RHRITAEPIV AAGLVFAMDS
QSTVTATTAG GGRVWSVDLR PAGESGRSVS GGGLAFEGNR IFVTTGYGEL VALDARTGAV
AWRQKVGSTI GGAPTVVNGV VYVLDREQTG WAVRANDGKV MWRSFGNKDM AGVMGASAPA
VSGSTVVFPS NTGALAGVDA RDGSQLWVAN VGGTRVGRAV SYFRDMTGDP VILGNTLYAG
TSAGGVGAYD MSNGMMKWHA REGAASPVLA AGNSVFLVND QAQLIRLDAA NGARVWAQKL
PYFTESVIRK QDRVWNHHGP VLAGSKLYLA SSDGYLRVFD PASGALIGTA QIPGGAAAAP
AVAGQTLYVV THDGQLIAYR