Gene Pden_2419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2419 
Symbol 
ID4580753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2423384 
End bp2424307 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content59% 
IMG OID639769749 
Productphage integrase family protein 
Protein accessionYP_916203 
Protein GI119385147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.342392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCTT TCTGGGACCA TTACAACCGG CGGCTGAAAG GTCGCGAGCC GCTGCCGACG 
AAGCGCAACT TCAAGACCCT GAGGCTGAGC TATGTAGAAA GCGATGCCTT CAAGCACCTG
AAGCCGCGCA CGAAGCGCGA TTACCAGAAG TACATGGAGC ATATCATCTC CATCTGGGGT
GATCTGGACC CGCGCAAGAT CGAGACGCAT CACATCTACA AGTTGCACCA GGCAAACGCC
GACCACTGGC GGCAGGCGAA TTATCTGGTG CAGGTGTTTG TCGTCCTGCT GAACCATGCC
CGGCTGATCG GTTTCTTAAA AAAAGAGCAT GGCAACCCCG CGAAAGGCAT CCCTCTTTTC
AAACAGCCTG GGGACGGCTG GGAGCCGTGG CCGGATGAGG TTCGGGCCGA ATTCGAGGAA
CTCGCCCCGC CGCGCCCGAG GCTCGTCTAC GAGCTTTCTA TCGGCCTCGG CCAGCGTATT
GGCGACACGC ATAAGATCCG CTGGGATCAC ATCAAGGATG GTGAGTATGA TTTCACCCAA
GGCAAGACCG ATAAGCCGCT CCTGGTCCCG CTGACCAATC GCCTCGCTGC CTATCTGAGC
ACAGTCAAGA AAGAGGGGTT GACGATTGTC TGCGGCCGCG ACGGCCGGCC TGCGGATTAC
CGCACGGTGA CCGAGGAGAT GCGCAAGATC AAAGCCGCAA TGAAGCATCC CGAGACGCAG
CGCTACGTCA CCCACGGGCT GCGAAAGAAC GCGACGATCG AGCTTTATCA GGCCGGTTGT
GATGACGAGA TGGTGAAGGC CGTGACCGGC CATTCAGGCG TGGAGATGCT GAAGAAATAC
GGCGGCCGGG TCCGCCAGCG CGAACTGGCG CGGCGTGCGC AGGACGCCCG AAACCGCGCA
GAACAGAACA AGAGCGGAAC ATGA
 
Protein sequence
MSAFWDHYNR RLKGREPLPT KRNFKTLRLS YVESDAFKHL KPRTKRDYQK YMEHIISIWG 
DLDPRKIETH HIYKLHQANA DHWRQANYLV QVFVVLLNHA RLIGFLKKEH GNPAKGIPLF
KQPGDGWEPW PDEVRAEFEE LAPPRPRLVY ELSIGLGQRI GDTHKIRWDH IKDGEYDFTQ
GKTDKPLLVP LTNRLAAYLS TVKKEGLTIV CGRDGRPADY RTVTEEMRKI KAAMKHPETQ
RYVTHGLRKN ATIELYQAGC DDEMVKAVTG HSGVEMLKKY GGRVRQRELA RRAQDARNRA
EQNKSGT