Gene Pden_2410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2410 
Symbol 
ID4580744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2406704 
End bp2408428 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content60% 
IMG OID639769739 
Producthypothetical protein 
Protein accessionYP_916194 
Protein GI119385138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.733646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.139754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAC ATGAGAGGGG CGCGCTTTCC GCGAATGCGC CGAAGTCGGG AGAGGCCGAT 
CTCGAAACGC GGCTTTCGCG CCTGAGGGCT GCGCTGGATG GCCGGGCGCC GAGGCTCGAC
GCGCCGTTCC CTGCCGTGAC CCTGATATTC TCGGTCTCCG ACGGCGCGGC GCGTGCCGTT
ACCGCCCAAG GCTCCGGCGC GACCGTCGAT GCGGCCTGGG AGGTGGCGGT GACCGATCTG
CACCGGAAGA TGGGGCGGAG AAAGCTGCGG GGCCGTTTTC TCCGCCTCGA CTGGGTCGAG
AAGGCCGAGA CCTGGACCTG GGCGCTGCTG CGCAAACGCC TGCGGGAGGT CAAGCGGAAC
TACAGCCGTC GCGGAATCGC TTTGGAGAAG GGCTTTACCC ATCTTTTTCT GGAGCAGGAG
CTGAACGGCA ATGCCATGCT CTATGGCGGA AACCAGATTT CCCATTGCGT GGTGAACGAA
AAGAATTTCC TGATCTATGC GCAGCAGAAA TACGGCTCAG GCATCACGGT CGATTTCGCG
GATGATCGCG AGGTTCATGT TTTCGACACC GCGGGCCTGT TCTGCGGCGA GGACGGCGTT
CTTCACGAGC TTTACGGTGC TGGCAGGAAT GCGGGCCGGC GCAAGATCGA TCCGCTGGAT
GTCGATACCT TGCGCGGGAT CATCGGCGAT GCGTCGGATT TCCTCGCGCA TCAGGTCGGT
GCGGACGGCC GCTTCATCTA TGGCTATCAC CCCTGCTTCG ACCGCCAGAT CCCGGCCTAC
AACGCCCTGC GCCATGCCAG CACCACCTAT TCCATGCTTG AGGCGTGGGA GCTGACGCGC
GAACCCGGGC TTTTGGCGGC GATCGAGCGG GCGCTGGAAT ATCTATGCCG GCAATTCATT
CGCACAGCGG GCGATGACAT GGCATTCGTG GTCGATACCG GAGACGAGAT CAAACTCGGT
GCCAATGCGA CGGCCATTCT CGCAATGTCG AAATACGCCT CTCTCATGGG CACCGACCGC
TATGCCGGCA TCATGGAAAA TCTTGCCTGC GGCATCCTGC ACATGCAGGC CGAGGACGGC
TCTTTCACGC ATGTGCTGAC CTGGCCCGAC CTTGCGGTAA AGGAAAGGTT CCGGATCGTC
TATTACGAGG GCGAGGCGGC CTTTGCCCTG ATGCGGCTCT ACAGCCTCAG CAAGGATGAG
CGCTGGATCG CCGCGGTCGA AAAGGCATTC GGCCATTTCA TCGAAAAGGA TTACTGGAAG
CACCACGATC ATTGGTTGAG TTACTGCACC AACGAACTGA CGCTCTATCG CCCCGAGATG
CGGTATTTCC GGTTTGGAAT CAGGAATTTC GAGGGTTTTC TCGACTTCGT CCTGCAACGG
ATCACCACCT TTCCGACCTT GCTCGAACTG ATGATGGCGG GGCGCAAGAT GCTTGACCGC
CTGAAGGCGA TGCCCGAAGG AGCAGAGCTT CTGGCCGGGG TGGATGAGGC GAAGTTCGAA
CAGGCGTTGC ATTTCCGGGC CTCATATCTG CTGAACGGCC ACTTCTGGCC GGAATATGCG
ATGTTCTGCC GCAATCCCGA CCGGATCCTC GGCTCGTTCT TCATCCGGCA CCACGCATTT
CGTGTCCGGA TCGACGATGT AGAGCACTAT CTGTCGGGAC TGGTGGCATA TGCAGATTAT
ATCGAGGCGG TAGCGGGATC TTCCGATGGC GCTGTCCGGG CCTGA
 
Protein sequence
MTKHERGALS ANAPKSGEAD LETRLSRLRA ALDGRAPRLD APFPAVTLIF SVSDGAARAV 
TAQGSGATVD AAWEVAVTDL HRKMGRRKLR GRFLRLDWVE KAETWTWALL RKRLREVKRN
YSRRGIALEK GFTHLFLEQE LNGNAMLYGG NQISHCVVNE KNFLIYAQQK YGSGITVDFA
DDREVHVFDT AGLFCGEDGV LHELYGAGRN AGRRKIDPLD VDTLRGIIGD ASDFLAHQVG
ADGRFIYGYH PCFDRQIPAY NALRHASTTY SMLEAWELTR EPGLLAAIER ALEYLCRQFI
RTAGDDMAFV VDTGDEIKLG ANATAILAMS KYASLMGTDR YAGIMENLAC GILHMQAEDG
SFTHVLTWPD LAVKERFRIV YYEGEAAFAL MRLYSLSKDE RWIAAVEKAF GHFIEKDYWK
HHDHWLSYCT NELTLYRPEM RYFRFGIRNF EGFLDFVLQR ITTFPTLLEL MMAGRKMLDR
LKAMPEGAEL LAGVDEAKFE QALHFRASYL LNGHFWPEYA MFCRNPDRIL GSFFIRHHAF
RVRIDDVEHY LSGLVAYADY IEAVAGSSDG AVRA