Gene Pden_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2404 
Symbol 
ID4579259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2398439 
End bp2399194 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID639769733 
Producthypothetical protein 
Protein accessionYP_916188 
Protein GI119385132 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.616396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGTT TTATCGAGGG CGCGAACCGG GATCAGACAA CGCTTTTTCC CGAGTGTTTG 
GAGGACTGGG TCAGCGAAGA TAACCTCGTC CGTGTCGTCG ATCTCTTCGT CAATGACCTC
GATCTGGCCT CCTTGGGGTT TCATCGTCAT GCAGCCGCGC GGACGGGGCG GCCGGGCTAT
CATCCGGCGG TGCTGCTCAA GCTGTTCATC TACGGCTATC TGAACCGCAT CCCGTCCAGT
CGGCGCCTTG AGCGCGAGGC AGGGCGCAAT GTCGAGGTGA TGTGGCTGAC CGGGCGGCTG
GTGCCCGACC ACAAGACCAT CGCTGATTTC CGGCGCGAGA ACGGCCCGGC CATTCGCCGG
ACCTGTGCCG AGTTCGTGGA GCTCTGCCGC CGGATCGGCG TGCTGAGGGG CGTCTGCGTT
GCCGTGGACG GCAGCAAGTT CAAGGCTGTC AACAATCGCG ACCGGAACTT CACCAAGGCG
AAGATCGCCA GCCGCCTGGC ACATCTGGAG CAAGAGGTCG GCCGCTATAT CGAGGAGGCC
GAGCGAGCGG ATCGGCAGGA AACCGGCGAG GCACGCGCCG AAAAAATCGC CCATCTGACC
AGCCGTTATC ATCGCGTCCG GCTGGAAATG GACCGTATGA TAACGCTGCG CCGGGAGCTG
GAAACGGCGC CGGATGGGCA GATATCTCTG ACAGACCCGG ACGCCCGCGC CATGGCCACG
CGGGCGCAGC ATAGTGGGCA TGTGGGCGCA GCATAG
 
Protein sequence
MSGFIEGANR DQTTLFPECL EDWVSEDNLV RVVDLFVNDL DLASLGFHRH AAARTGRPGY 
HPAVLLKLFI YGYLNRIPSS RRLEREAGRN VEVMWLTGRL VPDHKTIADF RRENGPAIRR
TCAEFVELCR RIGVLRGVCV AVDGSKFKAV NNRDRNFTKA KIASRLAHLE QEVGRYIEEA
ERADRQETGE ARAEKIAHLT SRYHRVRLEM DRMITLRREL ETAPDGQISL TDPDARAMAT
RAQHSGHVGA A