Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2404 |
Symbol | |
ID | 4579259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2398439 |
End bp | 2399194 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639769733 |
Product | hypothetical protein |
Protein accession | YP_916188 |
Protein GI | 119385132 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3666] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.616396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGGTT TTATCGAGGG CGCGAACCGG GATCAGACAA CGCTTTTTCC CGAGTGTTTG GAGGACTGGG TCAGCGAAGA TAACCTCGTC CGTGTCGTCG ATCTCTTCGT CAATGACCTC GATCTGGCCT CCTTGGGGTT TCATCGTCAT GCAGCCGCGC GGACGGGGCG GCCGGGCTAT CATCCGGCGG TGCTGCTCAA GCTGTTCATC TACGGCTATC TGAACCGCAT CCCGTCCAGT CGGCGCCTTG AGCGCGAGGC AGGGCGCAAT GTCGAGGTGA TGTGGCTGAC CGGGCGGCTG GTGCCCGACC ACAAGACCAT CGCTGATTTC CGGCGCGAGA ACGGCCCGGC CATTCGCCGG ACCTGTGCCG AGTTCGTGGA GCTCTGCCGC CGGATCGGCG TGCTGAGGGG CGTCTGCGTT GCCGTGGACG GCAGCAAGTT CAAGGCTGTC AACAATCGCG ACCGGAACTT CACCAAGGCG AAGATCGCCA GCCGCCTGGC ACATCTGGAG CAAGAGGTCG GCCGCTATAT CGAGGAGGCC GAGCGAGCGG ATCGGCAGGA AACCGGCGAG GCACGCGCCG AAAAAATCGC CCATCTGACC AGCCGTTATC ATCGCGTCCG GCTGGAAATG GACCGTATGA TAACGCTGCG CCGGGAGCTG GAAACGGCGC CGGATGGGCA GATATCTCTG ACAGACCCGG ACGCCCGCGC CATGGCCACG CGGGCGCAGC ATAGTGGGCA TGTGGGCGCA GCATAG
|
Protein sequence | MSGFIEGANR DQTTLFPECL EDWVSEDNLV RVVDLFVNDL DLASLGFHRH AAARTGRPGY HPAVLLKLFI YGYLNRIPSS RRLEREAGRN VEVMWLTGRL VPDHKTIADF RRENGPAIRR TCAEFVELCR RIGVLRGVCV AVDGSKFKAV NNRDRNFTKA KIASRLAHLE QEVGRYIEEA ERADRQETGE ARAEKIAHLT SRYHRVRLEM DRMITLRREL ETAPDGQISL TDPDARAMAT RAQHSGHVGA A
|
| |